RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 BAZ2BQ9UIF8 2168 aaKnown RBP9.77□□□□□ -0.85
TROAP-208ENST00000548817 PALM3A6NDB9 673 aaPredicted RBP9.77□□□□□ -0.85
TROAP-208ENST00000548817 C2CD4DB7Z1M9 353 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 H3BRB1 525 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 SMIM10L2AP0DMW4 78 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 SMIM10L2BP0DMW5 78 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 ITIH3Q06033 890 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 COL9A2Q14055 689 aaPredicted RBP9.77□□□□□ -0.85
TROAP-208ENST00000548817 NEDD9Q14511 834 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 WTAPQ15007 396 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 ACAP1Q15027 740 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 TPRNQ4KMQ1 711 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 CES5AQ6NT32 575 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 SYCE2Q6PIF2 218 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 CATIPQ7Z7H3 387 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 NPAS4Q8IUM7 802 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 CUL5Q93034 780 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 USP26Q9BXU7 913 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 TUT1Q9H6E5 874 aaKnown RBP9.77□□□□□ -0.85
TROAP-208ENST00000548817 TSHZ2Q9NRE2 1034 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 AAASQ9NRG9 546 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 RNF216Q9NWF9 866 aaPredicted RBP9.77□□□□□ -0.85
TROAP-208ENST00000548817 MAD2L2Q9UI95 211 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 USTQ9Y2C2 406 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 KAT6AQ92794 2004 aa9.77□□□□□ -0.85
TROAP-208ENST00000548817 PNMA6FA0A0J9YX94 578 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 PRR5-ARHGAP8B1AHC4 643 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 PER2O15055 1255 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 STAM2O75886 525 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 RPLP2P05387 115 aaKnown RBP9.76□□□□□ -0.85
TROAP-208ENST00000548817 STAG3L1P0CL83 205 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 UBA1P22314 1058 aaKnown RBP9.76□□□□□ -0.85
TROAP-208ENST00000548817 TECP42680 631 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 MTHFRP42898 656 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 ARHGAP8P85298 464 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 GHRHRQ02643 423 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 GRM4Q14833 912 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 HSDL1Q3SXM5 330 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 TAF2Q6P1X5 1199 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 CRIPAKQ8N1N5 446 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 TDRD5Q8NAT2 981 aaKnown RBP9.76□□□□□ -0.85
TROAP-208ENST00000548817 CASP10Q92851 521 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 MTMR8Q96EF0 704 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 PIGSQ96S52 555 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 FTHL17Q9BXU8 183 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 RNPEPQ9H4A4 650 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 ZNF215Q9UL58 517 aaPredicted RBP9.76□□□□□ -0.85
TROAP-208ENST00000548817 PCDHB12Q9Y5F1 795 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 GPR179Q6PRD1 2367 aa9.76□□□□□ -0.85
TROAP-208ENST00000548817 OPLAHO14841 1288 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 FSCN2O14926 492 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 IGHDP01880 384 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 LGALS2P05162 132 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 ADRB1P08588 477 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 GHRP10912 638 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 NPR3P17342 541 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 RBM10P98175 930 aaKnown RBP9.75□□□□□ -0.85
TROAP-208ENST00000548817 SP2Q02086 613 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 LPIN1Q14693 890 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 SEC23AQ15436 765 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 CYB5R4Q7L1T6 521 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 CYFIP1Q7L576 1253 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 NLRX1Q86UT6 975 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 GIMAP8Q8ND71 665 aaPredicted RBP9.75□□□□□ -0.85
TROAP-208ENST00000548817 NCOA7Q8NI08 942 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 SMARCC2Q8TAQ2 1214 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 PIBF1Q8WXW3 757 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 ZFP91Q96JP5 570 aaPredicted RBP9.75□□□□□ -0.85
TROAP-208ENST00000548817 ADAM7Q9H2U9 754 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 POMKQ9H5K3 350 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 RIOX1Q9H6W3 641 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 SEC63Q9UGP8 760 aaKnown RBP9.75□□□□□ -0.85
TROAP-208ENST00000548817 LZTS1Q9Y250 596 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 SQORQ9Y6N5 450 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 R4GN57 208 aa9.75□□□□□ -0.85
TROAP-208ENST00000548817 CEP295Q9C0D2 2601 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 FIBPO43427 364 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 PI15O43692 258 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 PPP1R11O60927 126 aaPredicted RBP9.74□□□□□ -0.85
TROAP-208ENST00000548817 CHRNA1P02708 482 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 SP100P23497 879 aaPredicted RBP9.74□□□□□ -0.85
TROAP-208ENST00000548817 KIF5BP33176 963 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 ADAM17P78536 824 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 LMNB2Q03252 620 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 UTP14CQ5TAP6 766 aaKnown RBP9.74□□□□□ -0.85
TROAP-208ENST00000548817 XRRA1Q6P2D8 792 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 METTL7BQ6UX53 244 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 TSHZ1Q6ZSZ6 1077 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 RSPH3Q86UC2 560 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 IL31RAQ8NI17 732 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 CTCFLQ8NI51 663 aaPredicted RBP9.74□□□□□ -0.85
TROAP-208ENST00000548817 RRP36Q96EU6 259 aaKnown RBP9.74□□□□□ -0.85
TROAP-208ENST00000548817 YTHDC1Q96MU7 727 aaKnown RBP9.74□□□□□ -0.85
TROAP-208ENST00000548817 RTKNQ9BST9 563 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 SMOC2Q9H3U7 446 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 NGRNQ9NPE2 291 aaKnown RBP9.74□□□□□ -0.85
TROAP-208ENST00000548817 SETD4Q9NVD3 440 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 RTEL1Q9NZ71 1219 aa9.74□□□□□ -0.85
TROAP-208ENST00000548817 ZFYVE26Q68DK2 2539 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 SPATA31C2B4DYI2 1134 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms