RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CD52P31358 61 aa19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 ZNF76P36508 570 aa19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 SLC26A2P50443 739 aa19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 ABHD15Q6UXT9 468 aa19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 PLA2G4DQ86XP0 818 aa19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 CCDC60Q8IWA6 550 aaPredicted RBP19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 TMEM192Q8IY95 271 aa19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 REXO1Q8N1G1 1221 aaKnown RBP19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 IL17RAQ96F46 866 aa19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 CCDC136Q96JN2 1154 aa19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 IGSF9BQ9UPX0 1349 aa19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 POTEB3A0JP26 581 aa19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 PRPF3O43395 683 aaKnown RBP19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 TMEM62Q0P6H9 643 aa19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 GPM6BQ13491 265 aa19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 NTRK3Q16288 839 aa19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 TIGD5Q53EQ6 642 aa19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 IER5Q5VY09 327 aa19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 POTEBQ6S5H4 581 aa19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 ATP8B4Q8TF62 1192 aa19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 CCDC12Q8WUD4 166 aaPredicted RBP19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 TNPO1Q92973 898 aaKnown RBP19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 PHKBQ93100 1093 aa19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 SQORQ9Y6N5 450 aa19.79■□□□□ 0.76
CHMP1A-205ENST00000548650 KDM3AQ9Y4C1 1321 aa19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 SMIM35A0A1B0GVV1 85 aa19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 IPO5O00410 1097 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 ENPP3O14638 875 aa19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 REC8O95072 547 aa19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 CTNNB1P35222 781 aa19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 SETQ01105 290 aaPredicted RBP19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 PTPROQ16827 1216 aa19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 MTHFD1LQ6UB35 978 aa19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 FIBCD1Q8N539 461 aa19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 RNF26Q9BY78 433 aaPredicted RBP19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 C6orf50Q9HD87 102 aa19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 COL1A2P08123 1366 aa19.78■□□□□ 0.76
CHMP1A-205ENST00000548650 ZBTB42B2RXF5 422 aa19.77■□□□□ 0.76
CHMP1A-205ENST00000548650 C5orf67F2Z3F1 127 aa19.77■□□□□ 0.76
CHMP1A-205ENST00000548650 M0QZ92 97 aa19.77■□□□□ 0.76
CHMP1A-205ENST00000548650 BACH1O14867 736 aa19.77■□□□□ 0.76
CHMP1A-205ENST00000548650 EVCP57679 992 aa19.77■□□□□ 0.76
CHMP1A-205ENST00000548650 FAM160B1Q5W0V3 765 aa19.77■□□□□ 0.76
CHMP1A-205ENST00000548650 MCTP2Q6DN12 878 aa19.77■□□□□ 0.76
CHMP1A-205ENST00000548650 CRIPAKQ8N1N5 446 aa19.77■□□□□ 0.76
CHMP1A-205ENST00000548650 RASGRP4Q8TDF6 673 aa19.77■□□□□ 0.76
CHMP1A-205ENST00000548650 LENG9Q96B70 501 aa19.77■□□□□ 0.76
CHMP1A-205ENST00000548650 ZNF689Q96CS4 500 aaPredicted RBP19.77■□□□□ 0.76
CHMP1A-205ENST00000548650 UIMC1Q96RL1 719 aa19.77■□□□□ 0.76
CHMP1A-205ENST00000548650 HBP1O60381 514 aa19.76■□□□□ 0.75
CHMP1A-205ENST00000548650 PPFIA3O75145 1194 aa19.76■□□□□ 0.75
CHMP1A-205ENST00000548650 IFNAR1P17181 557 aa19.76■□□□□ 0.75
CHMP1A-205ENST00000548650 KCNA5P22460 613 aa19.76■□□□□ 0.75
CHMP1A-205ENST00000548650 PSMA5P28066 241 aa19.76■□□□□ 0.75
CHMP1A-205ENST00000548650 MIS18BP1Q6P0N0 1132 aa19.76■□□□□ 0.75
CHMP1A-205ENST00000548650 CLP1Q92989 425 aaKnown RBP19.76■□□□□ 0.75
CHMP1A-205ENST00000548650 ZNF577Q9BSK1 485 aa19.76■□□□□ 0.75
CHMP1A-205ENST00000548650 FTHL17Q9BXU8 183 aa19.76■□□□□ 0.75
CHMP1A-205ENST00000548650 CELF4Q9BZC1 486 aaKnown RBP19.76■□□□□ 0.75
CHMP1A-205ENST00000548650 ZNF302Q9NR11 478 aa19.76■□□□□ 0.75
CHMP1A-205ENST00000548650 PADI3Q9ULW8 664 aa19.76■□□□□ 0.75
CHMP1A-205ENST00000548650 DGKIO75912 1065 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 ATP4AP20648 1035 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 GNA11P29992 359 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 PDIA3P30101 505 aaKnown RBP19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 CIITAP33076 1130 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 PAK2Q13177 524 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 COL19A1Q14993 1142 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 LEXMQ3ZCV2 418 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 ZNF746Q6NUN9 644 aaPredicted RBP19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 PDXDC2PQ6P474 469 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 RTN4RL1Q86UN2 441 aaPredicted RBP19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 BANK1Q8NDB2 785 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 CCDC148Q8NFR7 591 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 SLC26A6Q9BXS9 759 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 TMX1Q9H3N1 280 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 NCOA5Q9HCD5 579 aaKnown RBP19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 VPS54Q9P1Q0 977 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 RWDD3Q9Y3V2 267 aa19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 FNDC1Q4ZHG4 1894 aaPredicted RBP19.75■□□□□ 0.75
CHMP1A-205ENST00000548650 KLRC1P26715 233 aa19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 BMPR1AP36894 532 aa19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 KRT76Q01546 638 aa19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 AKAP17AQ02040 695 aaKnown RBP19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 TOB2Q14106 344 aaPredicted RBP19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 BTG3Q14201 252 aaPredicted RBP19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 PRR16Q569H4 304 aa19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 TCEAL5Q5H9L2 206 aa19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 SWSAP1Q6NVH7 229 aa19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 NPAS4Q8IUM7 802 aa19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 NME8Q8N427 588 aa19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 C11orf84Q9BUA3 381 aaPredicted RBP19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 NSUN3Q9H649 340 aaKnown RBP19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 TBC1D22BQ9NU19 505 aa19.74■□□□□ 0.75
CHMP1A-205ENST00000548650 PLXNA4Q9HCM2 1894 aa19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 EPB41L2O43491 1005 aaKnown RBP19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 EDIL3O43854 480 aa19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 C22orf31O95567 290 aa19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 RB1P06400 928 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms