RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 MRPL42Q9Y6G3 142 aaKnown RBP11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 PTPRZ1P23471 2315 aaPredicted RBP11.2□□□□□ -0.62
SLC48A1-206ENST00000548498 CCDC69A6NI79 296 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 GCOM1H8Y6P7 765 aaPredicted RBP11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 MEIS2O14770 477 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 DGKIO75912 1065 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 REC8O95072 547 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 PDGFBP01127 241 aaPredicted RBP11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 POLR2MP0CAP2 368 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 ICAM3P32942 547 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 NRIP1P48552 1158 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 ARHGAP4P98171 946 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 RBM10P98175 930 aaKnown RBP11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 SIGLEC14Q08ET2 396 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 COASYQ13057 564 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 SEMA3FQ13275 785 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 PKN1Q16512 942 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 ADCK5Q3MIX3 580 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 EFHBQ8N7U6 833 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 RRP36Q96EU6 259 aaKnown RBP11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 GPR20Q99678 358 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 EHMT1Q9H9B1 1298 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 PPP4R2Q9NY27 417 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 SLC12A7Q9Y666 1083 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 C2orf16Q68DN1 1984 aa11.19□□□□□ -0.62
SLC48A1-206ENST00000548498 MYH9P35579 1960 aaKnown RBP11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 NOP56O00567 594 aaKnown RBP11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 ENPP3O14638 875 aa11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 PLEKHA8P1O95397 391 aa11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 CCND2P30279 289 aa11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 MRPS9P82933 396 aaKnown RBP11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 PAN2Q504Q3 1202 aaKnown RBP11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 UTP14CQ5TAP6 766 aaKnown RBP11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 RBM23Q86U06 439 aaKnown RBP11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 HOMER1Q86YM7 354 aa11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 SPPL3Q8TCT6 385 aa11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 ATOH1Q92858 354 aaPredicted RBP11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 P2RX5Q93086 422 aa11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 RPGRIP1Q96KN7 1286 aa11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 MYL10Q9BUA6 226 aa11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 PLVAPQ9BX97 442 aa11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 FAM217BQ9NTX9 383 aaPredicted RBP11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 RBM28Q9NW13 759 aaKnown RBP11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 BRPF3Q9ULD4 1205 aa11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 CACNA1AO00555 2505 aa11.18□□□□□ -0.62
SLC48A1-206ENST00000548498 H0Y858 1186 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 hCG_1984214I3L0E3 225 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 NEFLP07196 543 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 GNAT1P11488 350 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 AVPR2P30518 371 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 GATMP50440 423 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 SP4Q02446 784 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 FBXO47Q5MNV8 452 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 PPP1R18Q6NYC8 613 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 METTL7BQ6UX53 244 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 CYFIP1Q7L576 1253 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 ASCL5Q7RTU5 278 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 FCHSD1Q86WN1 690 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 CMTR2Q8IYT2 770 aaKnown RBP11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 CRIPAKQ8N1N5 446 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 ZNF713Q8N859 430 aaPredicted RBP11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 KLHL23Q8NBE8 558 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 VN1R2Q8NFZ6 395 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 POF1BQ8WVV4 589 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 PHF7Q9BWX1 381 aaPredicted RBP11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 USP26Q9BXU7 913 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 AGO3Q9H9G7 860 aaKnown RBP11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 TLR9Q9NR96 1032 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 SNX14Q9Y5W7 946 aa11.17□□□□□ -0.62
SLC48A1-206ENST00000548498 CNTNAP5Q8WYK1 1306 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 GVINP1Q7Z2Y8 2422 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 CD52P31358 61 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 PTPN21Q16825 1174 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 PCNX4Q63HM2 1172 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 NFXL1Q6ZNB6 911 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 PPP2R3CQ969Q6 453 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 ZBTB10Q96DT7 871 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 SENP7Q9BQF6 1050 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 LRRC2Q9BYS8 371 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 TM6SF1Q9BZW5 370 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 SEC63Q9UGP8 760 aaKnown RBP11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 ZNF215Q9UL58 517 aaPredicted RBP11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 CDY2AQ9Y6F7 541 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 FANCMQ8IYD8 2048 aa11.16□□□□□ -0.62
SLC48A1-206ENST00000548498 NRCAMQ92823 1304 aa11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 SPATA31C2B4DYI2 1134 aa11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 PER2O15055 1255 aa11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 ZBTB43O43298 467 aa11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 SP100P23497 879 aaPredicted RBP11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 RTN1Q16799 776 aa11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 TSHZ1Q6ZSZ6 1077 aa11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 RTN4RL1Q86UN2 441 aaPredicted RBP11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 MICU3Q86XE3 530 aa11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 DNAJB3Q8WWF6 145 aa11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 SUSD6Q92537 303 aa11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 ZSWIM6Q9HCJ5 1215 aa11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 RTEL1Q9NZ71 1219 aa11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 TUBE1Q9UJT0 475 aa11.15□□□□□ -0.62
SLC48A1-206ENST00000548498 DMXL1Q9Y485 3027 aa11.14□□□□□ -0.63
SLC48A1-206ENST00000548498 CCDC196A0A1B0GTZ2 297 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms