RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SMARCA1P28370 1054 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 MCM5P33992 734 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 NRIP1P48552 1158 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 COL19A1Q14993 1142 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 PLCB4Q15147 1175 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 SMAD2Q15796 467 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 TRMT1LQ7Z2T5 733 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 RNF135Q8IUD6 432 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 SPPL3Q8TCT6 385 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 MICAL1Q8TDZ2 1067 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 PPP1R16BQ96T49 567 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 RC3H2Q9HBD1 1191 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 JPH1Q9HDC5 661 aaPredicted RBP13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 SLC9A2Q9UBY0 812 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 SLC12A7Q9Y666 1083 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 TECTAO75443 2155 aa13.68□□□□□ -0.22
TRAFD1-205ENST00000548277 PER2O15055 1255 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 STAG3L1P0CL83 205 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 MRE11P49959 708 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 STAT5BP51692 787 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 NHLH1Q02575 133 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 PAK2Q13177 524 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 MICU3Q86XE3 530 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 NPAS4Q8IUM7 802 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 FANCBQ8NB91 859 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 TMEM87BQ96K49 555 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 MXRA8Q9BRK3 442 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 SDF4Q9BRK5 362 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 PLVAPQ9BX97 442 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 CELF4Q9BZC1 486 aaKnown RBP13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 CDHR5Q9HBB8 845 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 KCNH7Q9NS40 1196 aa13.67□□□□□ -0.22
TRAFD1-205ENST00000548277 SLC27A2O14975 620 aa13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 CALM1P0DP23 149 aa13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 CALM2P0DP24 149 aa13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 CALM3P0DP25 149 aa13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 SCG2P13521 617 aa13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 KLRC1P26715 233 aa13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 ACTR2P61160 394 aa13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 RBM10P98175 930 aaKnown RBP13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 KRT76Q01546 638 aa13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 SMAD4Q13485 552 aaKnown RBP13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 CMTR2Q8IYT2 770 aaKnown RBP13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 TMEM260Q9NX78 707 aa13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 BARX2Q9UMQ3 279 aaPredicted RBP13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 PCDHB7Q9Y5E2 793 aa13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 PCDHA2Q9Y5H9 948 aa13.66□□□□□ -0.22
TRAFD1-205ENST00000548277 TBKBP1A7MCY6 615 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 MAFGO15525 162 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 ZNF76P36508 570 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 NAPAP54920 295 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 WWC2Q6AWC2 1192 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 MTHFD1LQ6UB35 978 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 P2RX5Q93086 422 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 PPP2R3CQ969Q6 453 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 TCEANC2Q96MN5 208 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 POP1Q99575 1024 aaKnown RBP13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 FTHL17Q9BXU8 183 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 TMX1Q9H3N1 280 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 CLEC1BQ9P126 229 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 HCSTQ9UBK5 93 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 NOC2LQ9Y3T9 749 aaKnown RBP13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 ZNF318Q5VUA4 2279 aa13.65□□□□□ -0.22
TRAFD1-205ENST00000548277 IGSF9BQ9UPX0 1349 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 BACH1O14867 736 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 MGEA5O60502 916 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 ITGB3BPQ13352 177 aaPredicted RBP13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 FAM102BQ5T8I3 360 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 CREB3L3Q68CJ9 461 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 TYW1BQ6NUM6 668 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 SYNE3Q6ZMZ3 975 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 TMTC3Q6ZXV5 915 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 PLPPR4Q7Z2D5 763 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 CRIPAKQ8N1N5 446 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 TNPO1Q92973 898 aaKnown RBP13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 MSLNLQ96KJ4 702 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 RPGRIP1Q96KN7 1286 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 MFSD14AQ96MC6 490 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 PHOX2BQ99453 314 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 ADAM2Q99965 735 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 APOL5Q9BWW9 433 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 LSG1Q9H089 658 aaKnown RBP13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 TLE6Q9H808 572 aa13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 AGO4Q9HCK5 861 aaKnown RBP13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 V9GY48 417 aaPredicted RBP13.64□□□□□ -0.23
TRAFD1-205ENST00000548277 SMIM35A0A1B0GVV1 85 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 DENND3A2RUS2 1198 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 SMCO2A6NFE2 343 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 RPS6KA5O75582 802 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 GLP2RO95838 553 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 LIFRP42702 1097 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 NAALADL2Q58DX5 795 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 HERC4Q5GLZ8 1057 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 CKAP2LQ8IYA6 745 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 EFHBQ8N7U6 833 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 TMEM40Q8WWA1 233 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 EDAQ92838 391 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 PBXIP1Q96AQ6 731 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 MTA3Q9BTC8 594 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms