RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TSR3Q9UJK0 312 aaKnown RBP7.66□□□□□ -1.18
SCAF11-211ENST00000547950 INSL6Q9Y581 213 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 SNX14Q9Y5W7 946 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 MTCH2Q9Y6C9 303 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 CNTNAP5Q8WYK1 1306 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 NRCAMQ92823 1304 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 LAMA4Q16363 1823 aa7.66□□□□□ -1.18
SCAF11-211ENST00000547950 CCDC196A0A1B0GTZ2 297 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 CAND2O75155 1236 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 CHRNA1P02708 482 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 CCT2P78371 535 aaKnown RBP7.65□□□□□ -1.18
SCAF11-211ENST00000547950 ADAM17P78536 824 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 TFF2Q03403 129 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 GRIK4Q16099 956 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 PFKFB3Q16875 520 aaPredicted RBP7.65□□□□□ -1.18
SCAF11-211ENST00000547950 CEP55Q53EZ4 464 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 PLEKHG4Q58EX7 1191 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 NYAP1Q6ZVC0 841 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 RSPH3Q86UC2 560 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 IL27Q8NEV9 243 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 DNAJB3Q8WWF6 145 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 ZBTB10Q96DT7 871 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 SDF4Q9BRK5 362 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 ANO3Q9BYT9 981 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 AZI2Q9H6S1 392 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 SUGCTQ9HAC7 445 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 AGO4Q9HCK5 861 aaKnown RBP7.65□□□□□ -1.18
SCAF11-211ENST00000547950 JPH1Q9HDC5 661 aaPredicted RBP7.65□□□□□ -1.18
SCAF11-211ENST00000547950 BARHL2Q9NY43 387 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 SLC9A2Q9UBY0 812 aa7.65□□□□□ -1.18
SCAF11-211ENST00000547950 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.64□□□□□ -1.19
SCAF11-211ENST00000547950 hCG_1984214I3L0E3 225 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 DDX39AO00148 427 aaKnown RBP7.64□□□□□ -1.19
SCAF11-211ENST00000547950 MEIS1O00470 390 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 LPXNO60711 386 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 REC8O95072 547 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 GHRP10912 638 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 SCG2P13521 617 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 INSRRP14616 1297 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 POU3F3P20264 500 aaPredicted RBP7.64□□□□□ -1.19
SCAF11-211ENST00000547950 RPS6KB1P23443 525 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 PSMA5P28066 241 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 STAT5BP51692 787 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 ACTR2P61160 394 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 ERVK-21P61565 698 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 AKAP17AQ02040 695 aaKnown RBP7.64□□□□□ -1.19
SCAF11-211ENST00000547950 KCNC4Q03721 635 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 ITGB3BPQ13352 177 aaPredicted RBP7.64□□□□□ -1.19
SCAF11-211ENST00000547950 FAM26DQ5JW98 314 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 MARCH8Q5T0T0 291 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 PPP1R18Q6NYC8 613 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 TAF2Q6P1X5 1199 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 ZNF713Q8N859 430 aaPredicted RBP7.64□□□□□ -1.19
SCAF11-211ENST00000547950 GDPD5Q8WTR4 605 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 KCNB2Q92953 911 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 PHKBQ93100 1093 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 TOP1MTQ969P6 601 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 TGS1Q96RS0 853 aaKnown RBP7.64□□□□□ -1.19
SCAF11-211ENST00000547950 YME1L1Q96TA2 773 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 PCYT2Q99447 389 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 C17orf80Q9BSJ5 609 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 IFIH1Q9BYX4 1025 aaKnown RBP7.64□□□□□ -1.19
SCAF11-211ENST00000547950 FAM49AQ9H0Q0 323 aaPredicted RBP7.64□□□□□ -1.19
SCAF11-211ENST00000547950 GLT8D2Q9H1C3 349 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 CDHR5Q9HBB8 845 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 C6orf50Q9HD87 102 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 TUBE1Q9UJT0 475 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 ARIH1Q9Y4X5 557 aaPredicted RBP7.64□□□□□ -1.19
SCAF11-211ENST00000547950 CHD9Q3L8U1 2897 aa7.64□□□□□ -1.19
SCAF11-211ENST00000547950 SCN10AQ9Y5Y9 1956 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 LINC01553A4QN01 128 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 RRN3P2A6NIE6 340 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 FAM86B1E9PN63 330 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 ENPP3O14638 875 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 BACH1O14867 736 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 ADAMTS3O15072 1205 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 PRPF3O43395 683 aaKnown RBP7.63□□□□□ -1.19
SCAF11-211ENST00000547950 NEFLP07196 543 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 FAM86B2P0C5J1 330 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 SREBF1P36956 1147 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 CLK2P49760 499 aaKnown RBP7.63□□□□□ -1.19
SCAF11-211ENST00000547950 RCAN1P53805 252 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 TMEM62Q0P6H9 643 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 AP3B2Q13367 1082 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 LPIN1Q14693 890 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 PKN1Q16512 942 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 PLPPR4Q7Z2D5 763 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 TRMT1LQ7Z2T5 733 aaKnown RBP7.63□□□□□ -1.19
SCAF11-211ENST00000547950 PLA2G4DQ86XP0 818 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 ADAMTS19Q8TE59 1207 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 TRAPPC12Q8WVT3 735 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 TNPO1Q92973 898 aaKnown RBP7.63□□□□□ -1.19
SCAF11-211ENST00000547950 SLC26A6Q9BXS9 759 aa7.63□□□□□ -1.19
SCAF11-211ENST00000547950 NCOA5Q9HCD5 579 aaKnown RBP7.63□□□□□ -1.19
SCAF11-211ENST00000547950 NFASCO94856 1347 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 MBLAC1A4D2B0 266 aaPredicted RBP7.62□□□□□ -1.19
SCAF11-211ENST00000547950 C3orf80F5H4A9 247 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 TNFRSF10AO00220 468 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 IPO5O00410 1097 aaKnown RBP7.62□□□□□ -1.19
SCAF11-211ENST00000547950 CCNE2O96020 404 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms