RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 POTEB3A0JP26 581 aa23.2■■□□□ 1.3
SSH1-207ENST00000547862 LINC00271P0C7V0 271 aa23.2■■□□□ 1.3
SSH1-207ENST00000547862 BMPR1AP36894 532 aa23.2■■□□□ 1.3
SSH1-207ENST00000547862 SREBF1P36956 1147 aa23.2■■□□□ 1.3
SSH1-207ENST00000547862 AP3B2Q13367 1082 aa23.2■■□□□ 1.3
SSH1-207ENST00000547862 TMEM266Q2M3C6 531 aa23.2■■□□□ 1.3
SSH1-207ENST00000547862 POTEBQ6S5H4 581 aa23.2■■□□□ 1.3
SSH1-207ENST00000547862 GJD3Q8N144 294 aa23.2■■□□□ 1.3
SSH1-207ENST00000547862 PABPC5Q96DU9 382 aaKnown RBP23.2■■□□□ 1.3
SSH1-207ENST00000547862 PPP1R16BQ96T49 567 aa23.2■■□□□ 1.3
SSH1-207ENST00000547862 GRXCR2A6NFK2 248 aa23.19■■□□□ 1.3
SSH1-207ENST00000547862 hCG_1984214I3L0E3 225 aa23.19■■□□□ 1.3
SSH1-207ENST00000547862 GATMP50440 423 aa23.19■■□□□ 1.3
SSH1-207ENST00000547862 METAP2P50579 478 aaKnown RBP eCLIP23.19■■□□□ 1.3
SSH1-207ENST00000547862 APOBRQ0VD83 1088 aa23.19■■□□□ 1.3
SSH1-207ENST00000547862 CENPQQ7L2Z9 268 aaPredicted RBP23.19■■□□□ 1.3
SSH1-207ENST00000547862 TRMT1LQ7Z2T5 733 aaKnown RBP23.19■■□□□ 1.3
SSH1-207ENST00000547862 PLA2G4DQ86XP0 818 aa23.19■■□□□ 1.3
SSH1-207ENST00000547862 ZNF713Q8N859 430 aaPredicted RBP23.19■■□□□ 1.3
SSH1-207ENST00000547862 NEK9Q8TD19 979 aa23.19■■□□□ 1.3
SSH1-207ENST00000547862 TNPO1Q92973 898 aaKnown RBP23.19■■□□□ 1.3
SSH1-207ENST00000547862 FAM122AQ96E09 287 aa23.19■■□□□ 1.3
SSH1-207ENST00000547862 ALG13Q9NP73 1137 aaKnown RBP23.19■■□□□ 1.3
SSH1-207ENST00000547862 PADI3Q9ULW8 664 aa23.19■■□□□ 1.3
SSH1-207ENST00000547862 HCN4Q9Y3Q4 1203 aa23.19■■□□□ 1.3
SSH1-207ENST00000547862 PCDHA2Q9Y5H9 948 aa23.19■■□□□ 1.3
SSH1-207ENST00000547862 MRPL42Q9Y6G3 142 aaKnown RBP23.19■■□□□ 1.3
SSH1-207ENST00000547862 FNDC1Q4ZHG4 1894 aaPredicted RBP23.18■■□□□ 1.3
SSH1-207ENST00000547862 IGSF9BQ9UPX0 1349 aa23.18■■□□□ 1.3
SSH1-207ENST00000547862 C5orf67F2Z3F1 127 aa23.18■■□□□ 1.3
SSH1-207ENST00000547862 CCNE2O96020 404 aa23.18■■□□□ 1.3
SSH1-207ENST00000547862 RPLP2P05387 115 aaKnown RBP23.18■■□□□ 1.3
SSH1-207ENST00000547862 KRT32Q14532 448 aa23.18■■□□□ 1.3
SSH1-207ENST00000547862 MTHFD1LQ6UB35 978 aa23.18■■□□□ 1.3
SSH1-207ENST00000547862 PLPPR4Q7Z2D5 763 aa23.18■■□□□ 1.3
SSH1-207ENST00000547862 CCDC60Q8IWA6 550 aaPredicted RBP23.18■■□□□ 1.3
SSH1-207ENST00000547862 ZNF689Q96CS4 500 aaPredicted RBP23.18■■□□□ 1.3
SSH1-207ENST00000547862 IGFLR1Q9H665 355 aa23.18■■□□□ 1.3
SSH1-207ENST00000547862 FAM217BQ9NTX9 383 aaPredicted RBP23.18■■□□□ 1.3
SSH1-207ENST00000547862 DGKIO75912 1065 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 RB1P06400 928 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 SCG2P13521 617 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 ADD1P35611 737 aaKnown RBP23.17■■□□□ 1.3
SSH1-207ENST00000547862 PLA2G5P39877 138 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 CLK2P49760 499 aaKnown RBP23.17■■□□□ 1.3
SSH1-207ENST00000547862 KRT76Q01546 638 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 NFX1Q12986 1120 aaKnown RBP23.17■■□□□ 1.3
SSH1-207ENST00000547862 FAM160B1Q5W0V3 765 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 PDXDC2PQ6P474 469 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 NPAS4Q8IUM7 802 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 FTHL17Q9BXU8 183 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 CELF4Q9BZC1 486 aaKnown RBP23.17■■□□□ 1.3
SSH1-207ENST00000547862 LMAN2LQ9H0V9 348 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 C11orf16Q9NQ32 467 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 TCEAL9Q9UHQ7 104 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 LRFN2Q9ULH4 789 aa23.17■■□□□ 1.3
SSH1-207ENST00000547862 SMIM35A0A1B0GVV1 85 aa23.16■■□□□ 1.3
SSH1-207ENST00000547862 FAM86B1E9PN63 330 aa23.16■■□□□ 1.3
SSH1-207ENST00000547862 MEIS1O00470 390 aa23.16■■□□□ 1.3
SSH1-207ENST00000547862 ADAMTS3O15072 1205 aa23.16■■□□□ 1.3
SSH1-207ENST00000547862 PPFIA3O75145 1194 aa23.16■■□□□ 1.3
SSH1-207ENST00000547862 FAM86B2P0C5J1 330 aa23.16■■□□□ 1.3
SSH1-207ENST00000547862 GTF2F1P35269 517 aaKnown RBP eCLIP23.16■■□□□ 1.3
SSH1-207ENST00000547862 HYAL1Q12794 435 aa23.16■■□□□ 1.3
SSH1-207ENST00000547862 Q6ZUG5 572 aa23.16■■□□□ 1.3
SSH1-207ENST00000547862 RTN4RL1Q86UN2 441 aaPredicted RBP23.16■■□□□ 1.3
SSH1-207ENST00000547862 CKAP2LQ8IYA6 745 aa23.16■■□□□ 1.3
SSH1-207ENST00000547862 CLP1Q92989 425 aaKnown RBP23.16■■□□□ 1.3
SSH1-207ENST00000547862 JAKMIP1Q96N16 626 aaKnown RBP23.16■■□□□ 1.3
SSH1-207ENST00000547862 GLT8D2Q9H1C3 349 aa23.16■■□□□ 1.3
SSH1-207ENST00000547862 ZNF302Q9NR11 478 aa23.16■■□□□ 1.3
SSH1-207ENST00000547862 MMP1P03956 469 aa23.15■■□□□ 1.3
SSH1-207ENST00000547862 KLRC1P26715 233 aa23.15■■□□□ 1.3
SSH1-207ENST00000547862 PFKFB3Q16875 520 aaPredicted RBP23.15■■□□□ 1.3
SSH1-207ENST00000547862 PUS10Q3MIT2 529 aaKnown RBP23.15■■□□□ 1.3
SSH1-207ENST00000547862 CMTR2Q8IYT2 770 aaKnown RBP23.15■■□□□ 1.3
SSH1-207ENST00000547862 BRF1Q92994 677 aa23.15■■□□□ 1.3
SSH1-207ENST00000547862 FAM50BQ9Y247 325 aa23.15■■□□□ 1.3
SSH1-207ENST00000547862 PI4K2BG5E9Z4 385 aa23.14■■□□□ 1.29
SSH1-207ENST00000547862 HBP1O60381 514 aa23.14■■□□□ 1.29
SSH1-207ENST00000547862 ATG7O95352 703 aa23.14■■□□□ 1.29
SSH1-207ENST00000547862 STAG3L1P0CL83 205 aa23.14■■□□□ 1.29
SSH1-207ENST00000547862 MIS18BP1Q6P0N0 1132 aa23.14■■□□□ 1.29
SSH1-207ENST00000547862 ABHD15Q6UXT9 468 aa23.14■■□□□ 1.29
SSH1-207ENST00000547862 RASGRP4Q8TDF6 673 aa23.14■■□□□ 1.29
SSH1-207ENST00000547862 ATP8B4Q8TF62 1192 aa23.14■■□□□ 1.29
SSH1-207ENST00000547862 ZNF577Q9BSK1 485 aa23.14■■□□□ 1.29
SSH1-207ENST00000547862 TMX1Q9H3N1 280 aa23.14■■□□□ 1.29
SSH1-207ENST00000547862 SQORQ9Y6N5 450 aa23.14■■□□□ 1.29
SSH1-207ENST00000547862 IPO5O00410 1097 aaKnown RBP23.13■■□□□ 1.29
SSH1-207ENST00000547862 LINC01565O15544 149 aa23.13■■□□□ 1.29
SSH1-207ENST00000547862 TBX10O75333 385 aa23.13■■□□□ 1.29
SSH1-207ENST00000547862 HMGB1P09429 215 aaKnown RBP23.13■■□□□ 1.29
SSH1-207ENST00000547862 SLC26A2P50443 739 aa23.13■■□□□ 1.29
SSH1-207ENST00000547862 DLX2Q07687 328 aaPredicted RBP23.13■■□□□ 1.29
SSH1-207ENST00000547862 TSGA10IPQ3SY00 556 aa23.13■■□□□ 1.29
SSH1-207ENST00000547862 SPOUT1Q5T280 376 aaKnown RBP23.13■■□□□ 1.29
SSH1-207ENST00000547862 SWSAP1Q6NVH7 229 aa23.13■■□□□ 1.29
SSH1-207ENST00000547862 NIPA1Q7RTP0 329 aa23.13■■□□□ 1.29
SSH1-207ENST00000547862 REXO1Q8N1G1 1221 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms