RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 JPH1Q9HDC5 661 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-215ENST00000547672 CGNQ9P2M7 1197 aaKnown RBP14.87□□□□□ -0.03
PTCH1-215ENST00000547672 RBPJLQ9UBG7 517 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 SLC9A2Q9UBY0 812 aa14.87□□□□□ -0.03
PTCH1-215ENST00000547672 LGALS16A8MUM7 142 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 AKR1B15C9JRZ8 316 aaPredicted RBP14.86□□□□□ -0.03
PTCH1-215ENST00000547672 TRAF5O00463 557 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 ZNF131P52739 623 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 SNRPFP62306 86 aaKnown RBP14.86□□□□□ -0.03
PTCH1-215ENST00000547672 UBXN1Q04323 297 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 TBX2Q13207 712 aaPredicted RBP14.86□□□□□ -0.03
PTCH1-215ENST00000547672 MOGSQ13724 837 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 HSP90AA2PQ14568 343 aaPredicted RBP14.86□□□□□ -0.03
PTCH1-215ENST00000547672 BMT2Q1RMZ1 405 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 CCDC144BQ3MJ40 725 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 HSP90AA4PQ58FG1 418 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 PADI6Q6TGC4 694 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.86□□□□□ -0.03
PTCH1-215ENST00000547672 EXOC8Q8IYI6 725 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 FAM133AQ8N9E0 248 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 ZNF507Q8TCN5 953 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 PIGOQ8TEQ8 1089 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 PANX2Q96RD6 677 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 VPS16Q9H269 839 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 C17orf75Q9HAS0 396 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 ZCCHC17Q9NP64 241 aaKnown RBP14.86□□□□□ -0.03
PTCH1-215ENST00000547672 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.86□□□□□ -0.03
PTCH1-215ENST00000547672 FAM184BQ9ULE4 1060 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 PPME1Q9Y570 386 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 PCDHA2Q9Y5H9 948 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 A0A0G2JMZ2 1700 aa14.86□□□□□ -0.03
PTCH1-215ENST00000547672 H0YCG3 227 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 PES1O00541 588 aaKnown RBP14.85□□□□□ -0.03
PTCH1-215ENST00000547672 STX10O60499 249 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 CELF2O95319 508 aaKnown RBP14.85□□□□□ -0.03
PTCH1-215ENST00000547672 KCNA2P16389 499 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 EDNRBP24530 442 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 YWHABP31946 246 aaKnown RBP14.85□□□□□ -0.03
PTCH1-215ENST00000547672 ERVK-9P63128 1117 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 ERVK-24P63145 666 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 APTXQ7Z2E3 356 aaKnown RBP14.85□□□□□ -0.03
PTCH1-215ENST00000547672 IRF2BP1Q8IU81 584 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 FAM178BQ8IXR5 827 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 BANK1Q8NDB2 785 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 ZNF397Q8NF99 534 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-215ENST00000547672 CNOT6LQ96LI5 555 aaKnown RBP14.85□□□□□ -0.03
PTCH1-215ENST00000547672 PARK7Q99497 189 aaKnown RBP14.85□□□□□ -0.03
PTCH1-215ENST00000547672 NOC4LQ9BVI4 516 aaKnown RBP14.85□□□□□ -0.03
PTCH1-215ENST00000547672 METTL14Q9HCE5 456 aaKnown RBP14.85□□□□□ -0.03
PTCH1-215ENST00000547672 KCND1Q9NSA2 647 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 SPTLC3Q9NUV7 552 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 PKD2L1Q9P0L9 805 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 TRAF3IP3Q9Y228 551 aa14.85□□□□□ -0.03
PTCH1-215ENST00000547672 CCL15-CCL14A0A0B4J2E2 113 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 TRIM49BA6NDI0 452 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 KIF2AO00139 706 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-215ENST00000547672 PDHXO00330 501 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 ATP9AO75110 1047 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 CNMDO75829 334 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 PBX1P40424 430 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 SMTNP53814 917 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 PMS1P54277 932 aaKnown RBP14.84□□□□□ -0.03
PTCH1-215ENST00000547672 INHBEP58166 350 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 TBC1D8BQ0IIM8 1120 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 MYBPC2Q14324 1141 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 NFIL3Q16649 462 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 CCL15Q16663 113 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 MAN2A1Q16706 1144 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 FAM160B1Q5W0V3 765 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 SPRYD7Q5W111 196 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 CHADLQ6NUI6 762 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 EPM2AIP1Q7L775 607 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-215ENST00000547672 HS2ST1Q7LGA3 356 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 SFR1Q86XK3 245 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 KIFAP3Q92845 792 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 ZFP91Q96JP5 570 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-215ENST00000547672 RUSC1Q9BVN2 902 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 KCNF1Q9H3M0 494 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 TMEM206Q9H813 350 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 NRBP2Q9NSY0 501 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 TYW1Q9NV66 732 aaKnown RBP14.84□□□□□ -0.03
PTCH1-215ENST00000547672 SLC5A4Q9NY91 659 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 TAB2Q9NYJ8 693 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 IVNS1ABPQ9Y6Y0 642 aa14.84□□□□□ -0.03
PTCH1-215ENST00000547672 NPHP3-ACAD11A0A0J9YXS1 232 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 ARHGAP6O43182 974 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 GCNT3O95395 438 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 RARRES1P49788 294 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 MARSP56192 900 aaKnown RBP14.83□□□□□ -0.04
PTCH1-215ENST00000547672 CNTN2Q02246 1040 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 RAD51AP2Q09MP3 1159 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 ADAM9Q13443 819 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 CCDC40Q4G0X9 1142 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 VWA3BQ502W6 1294 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 XKR9Q5GH70 373 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 XKR3Q5GH77 459 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 ODR4Q5SWX8 454 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 MCPH1Q8NEM0 835 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 SCFD1Q8WVM8 642 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 MS4A4AQ96JQ5 239 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms