RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 EML1O00423 815 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 CCNT1O60563 726 aaKnown RBP12.34□□□□□ -0.43
GCN1-202ENST00000547263 MARK3P27448 753 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 SMAD3P84022 425 aaKnown RBP12.34□□□□□ -0.43
GCN1-202ENST00000547263 GUCY1B3Q02153 619 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 SAFBQ15424 915 aaKnown RBP eCLIP12.34□□□□□ -0.43
GCN1-202ENST00000547263 UGCGQ16739 394 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 FAM160B1Q5W0V3 765 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 PDXDC2PQ6P474 469 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 NOSTRINQ8IVI9 506 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 SLFN12Q8IYM2 578 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 FAM184AQ8NB25 1140 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 INTS4Q96HW7 963 aaKnown RBP12.34□□□□□ -0.43
GCN1-202ENST00000547263 TUBE1Q9UJT0 475 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 NOD1Q9Y239 953 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 PCDHA2Q9Y5H9 948 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 KDM3AQ9Y4C1 1321 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 LOXHD1Q8IVV2 1947 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 BAIAP3O94812 1187 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 FGBP02675 491 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 ACRP10323 421 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 GJB2P29033 226 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 TOB1P50616 345 aaPredicted RBP12.33□□□□□ -0.44
GCN1-202ENST00000547263 CHMP4BP1P59074 171 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 TCTN1Q2MV58 587 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 ZNF484Q5JVG2 852 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 FAM109BQ6ICB4 259 aaPredicted RBP12.33□□□□□ -0.44
GCN1-202ENST00000547263 MTHFD1LQ6UB35 978 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 RUFY4Q6ZNE9 571 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 C4orf32Q8N8J7 132 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 RETREG2Q8NC44 543 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 FAM167AQ96KS9 214 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 RNPC3Q96LT9 517 aaKnown RBP12.33□□□□□ -0.44
GCN1-202ENST00000547263 UIMC1Q96RL1 719 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 NIFKQ9BYG3 293 aaKnown RBP12.33□□□□□ -0.44
GCN1-202ENST00000547263 OSBPL7Q9BZF2 842 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 TMEM60Q9H2L4 133 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 CXXC1Q9P0U4 656 aaPredicted RBP12.33□□□□□ -0.44
GCN1-202ENST00000547263 GABBR1Q9UBS5 961 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 KIF3AQ9Y496 699 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.33□□□□□ -0.44
GCN1-202ENST00000547263 SQORQ9Y6N5 450 aa12.33□□□□□ -0.44
GCN1-202ENST00000547263 IGKV6-21A0A0C4DH24 114 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 RSPH10B2B2RC85 870 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 BACH1O14867 736 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 LYPLA2O95372 231 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 C22orf31O95567 290 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 CHRNA1P02708 482 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 RSPH10BP0C881 870 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 FOSBP53539 338 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 EPHA7Q15375 998 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 PLEKHG4Q58EX7 1191 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 MIER3Q7Z3K6 550 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 LRCH3Q96II8 777 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 TCEAL9Q9UHQ7 104 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 COL4A6Q14031 1691 aa12.32□□□□□ -0.44
GCN1-202ENST00000547263 TMEM265A0A087WTH1 108 aa12.31□□□□□ -0.44
GCN1-202ENST00000547263 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.31□□□□□ -0.44
GCN1-202ENST00000547263 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.31□□□□□ -0.44
GCN1-202ENST00000547263 NEMFO60524 1076 aa12.31□□□□□ -0.44
GCN1-202ENST00000547263 OATP04181 439 aa12.31□□□□□ -0.44
GCN1-202ENST00000547263 THPOP40225 353 aa12.31□□□□□ -0.44
GCN1-202ENST00000547263 PRKCEQ02156 737 aa12.31□□□□□ -0.44
GCN1-202ENST00000547263 CNKSR3Q6P9H4 555 aa12.31□□□□□ -0.44
GCN1-202ENST00000547263 FAM43BQ6ZT52 329 aaPredicted RBP12.31□□□□□ -0.44
GCN1-202ENST00000547263 C4orf19Q8IY42 314 aa12.31□□□□□ -0.44
GCN1-202ENST00000547263 NME8Q8N427 588 aa12.31□□□□□ -0.44
GCN1-202ENST00000547263 TRAPPC12Q8WVT3 735 aa12.31□□□□□ -0.44
GCN1-202ENST00000547263 HSD17B14Q9BPX1 270 aa12.31□□□□□ -0.44
GCN1-202ENST00000547263 WRAP73Q9P2S5 460 aaPredicted RBP12.31□□□□□ -0.44
GCN1-202ENST00000547263 CEP131Q9UPN4 1083 aa12.31□□□□□ -0.44
GCN1-202ENST00000547263 TRPC6Q9Y210 931 aa12.31□□□□□ -0.44
GCN1-202ENST00000547263 ABHD14A-ACY1A0A1B0GW23 586 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 K7ELQ4 463 aaPredicted RBP12.3□□□□□ -0.44
GCN1-202ENST00000547263 MAGEB2O15479 319 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 SLC34A2O95436 690 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 P4HBP07237 508 aaKnown RBP12.3□□□□□ -0.44
GCN1-202ENST00000547263 KLRC1P26715 233 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 PSMC5P62195 406 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 CALCRLQ16602 461 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 XKR3Q5GH77 459 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 TTC38Q5R3I4 469 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 ANO5Q75V66 913 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 OTOP2Q7RTS6 562 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 KIAA0319LQ8IZA0 1049 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 PHOSPHO2Q8TCD6 241 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 DNAJB3Q8WWF6 145 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 ZBTB10Q96DT7 871 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 MTIF3Q9H2K0 278 aaKnown RBP12.3□□□□□ -0.44
GCN1-202ENST00000547263 TTC12Q9H892 705 aaPredicted RBP12.3□□□□□ -0.44
GCN1-202ENST00000547263 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.3□□□□□ -0.44
GCN1-202ENST00000547263 PCDHA12Q9UN75 941 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 SMC3Q9UQE7 1217 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 SAMM50Q9Y512 469 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 PPME1Q9Y570 386 aa12.3□□□□□ -0.44
GCN1-202ENST00000547263 CHMP2AO43633 222 aa12.29□□□□□ -0.44
GCN1-202ENST00000547263 BAG4O95429 457 aaKnown RBP12.29□□□□□ -0.44
GCN1-202ENST00000547263 QARSP47897 775 aaKnown RBP12.29□□□□□ -0.44
GCN1-202ENST00000547263 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.444e-7■■■■■ 40.3
GCN1-202ENST00000547263 MRPS6P82932 125 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms