RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ERFEQ4G0M1 354 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 CCDC65Q8IXS2 484 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 SYCE1Q8N0S2 351 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 SEC14L1Q92503 715 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 NOD2Q9HC29 1040 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 SUCLA2Q9P2R7 463 aaPredicted RBP15.48■□□□□ 0.07
SRP54-202ENST00000546080 BAIAP2L1Q9UHR4 511 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 PNMA2Q9UL42 364 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 CAND2O75155 1236 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 ADAM9Q13443 819 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 ECM1Q16610 540 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 SPDYCQ5MJ68 293 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 SH3RF3Q8TEJ3 882 aaPredicted RBP15.48■□□□□ 0.07
SRP54-202ENST00000546080 FAM212AQ96EL1 285 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 SELENOSQ9BQE4 189 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 TRIM31Q9BZY9 425 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 RAB17Q9H0T7 212 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 LRRC4CQ9HCJ2 640 aa15.48■□□□□ 0.07
SRP54-202ENST00000546080 ATAD5Q96QE3 1844 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 KAT6BQ8WYB5 2073 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 PPFIA2O75334 1257 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 MMEP08473 750 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 CHN1P15882 459 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 RASA1P20936 1047 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 SF3B3Q15393 1217 aaKnown RBP15.47■□□□□ 0.07
SRP54-202ENST00000546080 SPTY2D1Q68D10 685 aaPredicted RBP15.47■□□□□ 0.07
SRP54-202ENST00000546080 TLDC1Q6P9B6 456 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 DAAM2Q86T65 1068 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 CCDC63Q8NA47 563 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 CELF1Q92879 486 aaKnown RBP15.47■□□□□ 0.07
SRP54-202ENST00000546080 CUL5Q93034 780 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 TBC1D31Q96DN5 1066 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 TRIM51Q9BSJ1 452 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.47■□□□□ 0.07
SRP54-202ENST00000546080 HDAC9Q9UKV0 1011 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 STXBP5LQ9Y2K9 1186 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 TAF1P21675 1872 aa15.47■□□□□ 0.07
SRP54-202ENST00000546080 MYH7BA7E2Y1 1941 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 CETN3O15182 167 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 GSTA1P08263 222 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 RPSAP08865 295 aaKnown RBP15.46■□□□□ 0.07
SRP54-202ENST00000546080 H2AFZP0C0S5 128 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 UCHL3P15374 230 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 ADCY7P51828 1080 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 H2AFVQ71UI9 128 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 SLFN11Q7Z7L1 901 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 VPS36Q86VN1 386 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 KCTD10Q9H3F6 313 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 GOPCQ9HD26 462 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 ZNF652Q9Y2D9 606 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 ATP8B3O60423 1300 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 A0A0A6YYK5 440 aaPredicted RBP15.46■□□□□ 0.07
SRP54-202ENST00000546080 ASAP2O43150 1006 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 MARCH6O60337 910 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 BUB1BO60566 1050 aaPredicted RBP15.46■□□□□ 0.07
SRP54-202ENST00000546080 SLC9A1P19634 815 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 ITIH4Q14624 930 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 HERC4Q5GLZ8 1057 aaPredicted RBP15.46■□□□□ 0.07
SRP54-202ENST00000546080 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 NT5DC3Q86UY8 548 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 RSRC1Q96IZ7 334 aaKnown RBP15.46■□□□□ 0.07
SRP54-202ENST00000546080 ZNF317Q96PQ6 595 aaPredicted RBP15.46■□□□□ 0.07
SRP54-202ENST00000546080 ZNF287Q9HBT7 754 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 EMILIN3Q9NT22 766 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 SAMD15Q9P1V8 674 aa15.46■□□□□ 0.07
SRP54-202ENST00000546080 hCG_1984214I3L0E3 225 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 SMARCA1P28370 1054 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 EP400NLQ6ZTU2 488 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 ZC3H3Q8IXZ2 948 aaKnown RBP15.45■□□□□ 0.06
SRP54-202ENST00000546080 ZNF713Q8N859 430 aaPredicted RBP15.45■□□□□ 0.06
SRP54-202ENST00000546080 ATP8B4Q8TF62 1192 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 TGFBRAP1Q8WUH2 860 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 SCFD1Q8WVM8 642 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 EYA3Q99504 573 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 UBA5Q9GZZ9 404 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 SAP30BPQ9UHR5 308 aaKnown RBP15.45■□□□□ 0.06
SRP54-202ENST00000546080 AMFRQ9UKV5 643 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 SLC12A4Q9UP95 1085 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 PCDHA2Q9Y5H9 948 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 KDM3AQ9Y4C1 1321 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 KIF13BQ9NQT8 1826 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 FRMD3A2A2Y4 597 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 PPP1R12BO60237 982 aaPredicted RBP15.45■□□□□ 0.06
SRP54-202ENST00000546080 FGGP02679 453 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 AFPP02771 609 aaKnown RBP15.45■□□□□ 0.06
SRP54-202ENST00000546080 SHBGP04278 402 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 NR2F2P24468 414 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 ANXA13P27216 316 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 PRKCIP41743 596 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 TNNI2P48788 182 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 CACNB1Q02641 598 aaPredicted RBP15.45■□□□□ 0.06
SRP54-202ENST00000546080 NAA25Q14CX7 972 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 EXOC3L4Q17RC7 722 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 EDRF1Q3B7T1 1238 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 TCP11Q8WWU5 503 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 HES6Q96HZ4 224 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 TXLNGYQ9BZA5 131 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 NT5C3AQ9H0P0 336 aa15.45■□□□□ 0.06
SRP54-202ENST00000546080 EDIL3O43854 480 aa15.44■□□□□ 0.06
SRP54-202ENST00000546080 NUDT17P0C025 328 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms