RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ERVFC1P60507 584 aa16.95■□□□□ 0.3
RTN3-214ENST00000545432 NME8Q8N427 588 aa16.95■□□□□ 0.3
RTN3-214ENST00000545432 ATOH1Q92858 354 aaPredicted RBP16.95■□□□□ 0.3
RTN3-214ENST00000545432 NEK1Q96PY6 1258 aa16.95■□□□□ 0.3
RTN3-214ENST00000545432 CELF4Q9BZC1 486 aaKnown RBP16.95■□□□□ 0.3
RTN3-214ENST00000545432 SENP2Q9HC62 589 aa16.95■□□□□ 0.3
RTN3-214ENST00000545432 TLR9Q9NR96 1032 aa16.95■□□□□ 0.3
RTN3-214ENST00000545432 LZTS1Q9Y250 596 aa16.95■□□□□ 0.3
RTN3-214ENST00000545432 SMIM35A0A1B0GVV1 85 aa16.94■□□□□ 0.3
RTN3-214ENST00000545432 PER2O15055 1255 aa16.94■□□□□ 0.3
RTN3-214ENST00000545432 CSPG5O95196 566 aa16.94■□□□□ 0.3
RTN3-214ENST00000545432 GATMP50440 423 aa16.94■□□□□ 0.3
RTN3-214ENST00000545432 FAM189BP81408 668 aa16.94■□□□□ 0.3
RTN3-214ENST00000545432 RBM10P98175 930 aaKnown RBP16.94■□□□□ 0.3
RTN3-214ENST00000545432 SP4Q02446 784 aa16.94■□□□□ 0.3
RTN3-214ENST00000545432 DIEXFQ68CQ4 756 aaKnown RBP16.94■□□□□ 0.3
RTN3-214ENST00000545432 SYCE2Q6PIF2 218 aa16.94■□□□□ 0.3
RTN3-214ENST00000545432 SPZ1Q9BXG8 430 aa16.94■□□□□ 0.3
RTN3-214ENST00000545432 LNPKQ9C0E8 428 aa16.94■□□□□ 0.3
RTN3-214ENST00000545432 PCDHB12Q9Y5F1 795 aa16.94■□□□□ 0.3
RTN3-214ENST00000545432 PLXNA3P51805 1871 aa16.94■□□□□ 0.3
RTN3-214ENST00000545432 DOCK5Q9H7D0 1870 aa16.93■□□□□ 0.3
RTN3-214ENST00000545432 FGF18O76093 207 aa16.93■□□□□ 0.3
RTN3-214ENST00000545432 PLCB3Q01970 1234 aa16.93■□□□□ 0.3
RTN3-214ENST00000545432 PAN2Q504Q3 1202 aaKnown RBP16.93■□□□□ 0.3
RTN3-214ENST00000545432 ANKRD54Q6NXT1 300 aa16.93■□□□□ 0.3
RTN3-214ENST00000545432 ASCL5Q7RTU5 278 aa16.93■□□□□ 0.3
RTN3-214ENST00000545432 SMARCC2Q8TAQ2 1214 aa16.93■□□□□ 0.3
RTN3-214ENST00000545432 TNPO1Q92973 898 aaKnown RBP16.93■□□□□ 0.3
RTN3-214ENST00000545432 ZBTB10Q96DT7 871 aa16.93■□□□□ 0.3
RTN3-214ENST00000545432 IL25Q9H293 177 aa16.93■□□□□ 0.3
RTN3-214ENST00000545432 ERVK-5Q9HDB9 667 aa16.93■□□□□ 0.3
RTN3-214ENST00000545432 RGS18Q9NS28 235 aa16.93■□□□□ 0.3
RTN3-214ENST00000545432 DIAPH3Q9NSV4 1193 aa16.93■□□□□ 0.3
RTN3-214ENST00000545432 KIAA1671Q9BY89 1806 aa16.93■□□□□ 0.3
RTN3-214ENST00000545432 C9IYK1 514 aa16.92■□□□□ 0.3
RTN3-214ENST00000545432 H0Y858 1186 aa16.92■□□□□ 0.3
RTN3-214ENST00000545432 PDGFBP01127 241 aaPredicted RBP16.92■□□□□ 0.3
RTN3-214ENST00000545432 HOXB8P17481 243 aaPredicted RBP16.92■□□□□ 0.3
RTN3-214ENST00000545432 MARK3P27448 753 aa16.92■□□□□ 0.3
RTN3-214ENST00000545432 PLPPR4Q7Z2D5 763 aa16.92■□□□□ 0.3
RTN3-214ENST00000545432 GLG1Q92896 1179 aa16.92■□□□□ 0.3
RTN3-214ENST00000545432 CWH43Q9H720 699 aa16.92■□□□□ 0.3
RTN3-214ENST00000545432 JADE2Q9NQC1 790 aa16.92■□□□□ 0.3
RTN3-214ENST00000545432 AAASQ9NRG9 546 aa16.92■□□□□ 0.3
RTN3-214ENST00000545432 DMDP11532 3685 aa16.92■□□□□ 0.3
RTN3-214ENST00000545432 GVINP1Q7Z2Y8 2422 aa16.91■□□□□ 0.3
RTN3-214ENST00000545432 IFIT3O14879 490 aaKnown RBP16.91■□□□□ 0.3
RTN3-214ENST00000545432 MGEA5O60502 916 aa16.91■□□□□ 0.3
RTN3-214ENST00000545432 ATG7O95352 703 aa16.91■□□□□ 0.3
RTN3-214ENST00000545432 PAK2Q13177 524 aa16.91■□□□□ 0.3
RTN3-214ENST00000545432 PLCB4Q15147 1175 aa16.91■□□□□ 0.3
RTN3-214ENST00000545432 UBALD2Q8IYN6 164 aa16.91■□□□□ 0.3
RTN3-214ENST00000545432 COLGALT1Q8NBJ5 622 aa16.91■□□□□ 0.3
RTN3-214ENST00000545432 IGDCC4Q8TDY8 1250 aa16.91■□□□□ 0.3
RTN3-214ENST00000545432 MICAL1Q8TDZ2 1067 aa16.91■□□□□ 0.3
RTN3-214ENST00000545432 CUL5Q93034 780 aa16.91■□□□□ 0.3
RTN3-214ENST00000545432 FAM49AQ9H0Q0 323 aaPredicted RBP16.91■□□□□ 0.3
RTN3-214ENST00000545432 C1orf112Q9NSG2 853 aa16.91■□□□□ 0.3
RTN3-214ENST00000545432 TYW1Q9NV66 732 aaKnown RBP16.91■□□□□ 0.3
RTN3-214ENST00000545432 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
RTN3-214ENST00000545432 PCDHB7Q9Y5E2 793 aa16.91■□□□□ 0.3
RTN3-214ENST00000545432 PRR23AA6NEV1 266 aa16.9■□□□□ 0.3
RTN3-214ENST00000545432 PPFIA3O75145 1194 aa16.9■□□□□ 0.3
RTN3-214ENST00000545432 CYP21A2P08686 494 aa16.9■□□□□ 0.3
RTN3-214ENST00000545432 IGBP1P78318 339 aa16.9■□□□□ 0.3
RTN3-214ENST00000545432 KRT76Q01546 638 aa16.9■□□□□ 0.3
RTN3-214ENST00000545432 MTMR1Q13613 665 aa16.9■□□□□ 0.3
RTN3-214ENST00000545432 SLC24A5Q71RS6 500 aa16.9■□□□□ 0.3
RTN3-214ENST00000545432 ERMP1Q7Z2K6 904 aa16.9■□□□□ 0.3
RTN3-214ENST00000545432 MRPS27Q92552 414 aaKnown RBP16.9■□□□□ 0.3
RTN3-214ENST00000545432 ELAC1Q9H777 363 aaKnown RBP16.9■□□□□ 0.3
RTN3-214ENST00000545432 LRFN2Q9ULH4 789 aa16.9■□□□□ 0.3
RTN3-214ENST00000545432 PLXNA4Q9HCM2 1894 aa16.9■□□□□ 0.3
RTN3-214ENST00000545432 IGKV6D-21A0A0A0MT36 114 aa16.89■□□□□ 0.29
RTN3-214ENST00000545432 M0QZ92 97 aa16.89■□□□□ 0.29
RTN3-214ENST00000545432 TRDNQ13061 729 aa16.89■□□□□ 0.29
RTN3-214ENST00000545432 WTAPQ15007 396 aa16.89■□□□□ 0.29
RTN3-214ENST00000545432 FAM102BQ5T8I3 360 aa16.89■□□□□ 0.29
RTN3-214ENST00000545432 MTHFD1LQ6UB35 978 aa16.89■□□□□ 0.29
RTN3-214ENST00000545432 CHD1LQ86WJ1 897 aa16.89■□□□□ 0.29
RTN3-214ENST00000545432 TMEM105Q8N8V8 129 aa16.89■□□□□ 0.29
RTN3-214ENST00000545432 KREMEN2Q8NCW0 462 aa16.89■□□□□ 0.29
RTN3-214ENST00000545432 NGRNQ9NPE2 291 aaKnown RBP16.89■□□□□ 0.29
RTN3-214ENST00000545432 TMEM260Q9NX78 707 aa16.89■□□□□ 0.29
RTN3-214ENST00000545432 SORCS3Q9UPU3 1222 aa16.89■□□□□ 0.29
RTN3-214ENST00000545432 NOC2LQ9Y3T9 749 aaKnown RBP16.89■□□□□ 0.29
RTN3-214ENST00000545432 NFASCO94856 1347 aa16.89■□□□□ 0.29
RTN3-214ENST00000545432 ERICH2A1L162 156 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 TBKBP1A7MCY6 615 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 SRGAP2BP0DMP2 458 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 TECP42680 631 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 SLC26A2P50443 739 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 ANTXR2P58335 489 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 NUCB1Q02818 461 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 TMEM62Q0P6H9 643 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 AAMPQ13685 434 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 CATIPQ7Z7H3 387 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 KIAA0319LQ8IZA0 1049 aa16.88■□□□□ 0.29
RTN3-214ENST00000545432 TMEM40Q8WWA1 233 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms