RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 FZD9O00144 591 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 SRGAP3O43295 1099 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 TPD52L2O43399 206 aaKnown RBP5.4□□□□□ -1.54
SNHG1-222ENST00000545308 TGM5O43548 720 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 CYBBP04839 570 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 DBHP09172 617 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 ATF3P18847 181 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 FBLN1P23142 703 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 GRK2P25098 689 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 GRK3P35626 688 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 IARSP41252 1262 aaKnown RBP5.4□□□□□ -1.54
SNHG1-222ENST00000545308 PLP2Q04941 152 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 EFEMP1Q12805 493 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 PTPN21Q16825 1174 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 PAQR3Q6TCH7 311 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 OTOP1Q7RTM1 612 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 NAT16Q8N8M0 369 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 CLRN3Q8NCR9 226 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 TTC8Q8TAM2 541 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 DPF3Q92784 378 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 PMM1Q92871 262 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 CAMKK2Q96RR4 588 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 OXSMQ9NWU1 459 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 ZNF180Q9UJW8 692 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 SPEF1Q9Y4P9 236 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 BCL6P41182 706 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 KPNA1P52294 538 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-222ENST00000545308 LACTBP83111 547 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-222ENST00000545308 LSAMPQ13449 338 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 RTP5Q14D33 572 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 SPATS1Q496A3 300 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 VWA3BQ502W6 1294 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 FAM47CQ5HY64 1035 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 FAM102BQ5T8I3 360 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 NXNQ6DKJ4 435 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 CYP2R1Q6VVX0 501 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 HDGFL2Q7Z4V5 671 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-222ENST00000545308 NLRP10Q86W26 655 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 CCAR1Q8IX12 1150 aaKnown RBP5.39□□□□□ -1.55
SNHG1-222ENST00000545308 TCEAL8Q8IYN2 117 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 JPH3Q8WXH2 748 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-222ENST00000545308 FUBP3Q96I24 572 aaKnown RBP eCLIP5.39□□□□□ -1.55
SNHG1-222ENST00000545308 BDH2Q9BUT1 245 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 HCFC2Q9Y5Z7 792 aa5.39□□□□□ -1.55
SNHG1-222ENST00000545308 TRBV23OR9-2A0A075B6M9 112 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 LOC102724159A0A0B4J2E5 919 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 PLEKHD1A6NEE1 506 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 ZNF561-AS1K7EIQ3 104 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 PRICKLE3O43900 615 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-222ENST00000545308 ULK1O75385 1050 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 RFPL1O75677 317 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 MT-CO1P00395 513 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 AMY2AP04746 511 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 ZBTB48P10074 688 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-222ENST00000545308 MYBL2P10244 700 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 PDE6AP16499 860 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 ZSCAN20P17040 1043 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-222ENST00000545308 AMY2BP19961 511 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 RHBDL3P58872 404 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 ST5P78524 1137 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 OCRLQ01968 901 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 MLC1Q15049 377 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 PWP2Q15269 919 aaKnown RBP5.38□□□□□ -1.55
SNHG1-222ENST00000545308 PCBP2Q15366 365 aaKnown RBP eCLIP5.38□□□□□ -1.55
SNHG1-222ENST00000545308 ZFYVE27Q5T4F4 411 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 CCSAPQ6IQ19 270 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-222ENST00000545308 FSTL4Q6MZW2 842 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 OSTM1Q86WC4 334 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 C2orf69Q8N8R5 385 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 FNIP1Q8TF40 1166 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 SLC5A5Q92911 643 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 AHCYL2Q96HN2 611 aaKnown RBP5.38□□□□□ -1.55
SNHG1-222ENST00000545308 CHAMP1Q96JM3 812 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 KCNJ15Q99712 375 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 JAM3Q9BX67 310 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 SMURF1Q9HCE7 757 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 PDLIM7Q9NR12 457 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 CATSPERZQ9NTU4 200 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 IP6K2Q9UHH9 426 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 TIMM13Q9Y5L4 95 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-222ENST00000545308 ARHGEF11O15085 1522 aa5.38□□□□□ -1.55
SNHG1-222ENST00000545308 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-222ENST00000545308 A0A1W2PQJ5 194 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 TCRBV5S4A2TA0A5A2 114 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 DVL2O14641 736 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 GSTA4O15217 222 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 PPP1R11O60927 126 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-222ENST00000545308 PLA2G1BP04054 148 aaKnown RBP5.37□□□□□ -1.55
SNHG1-222ENST00000545308 ATF2P15336 505 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 JAM2P57087 298 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 SESN3P58005 492 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 RPL11P62913 178 aaKnown RBP5.37□□□□□ -1.55
SNHG1-222ENST00000545308 FOXO4P98177 505 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 KLF1Q13351 362 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-222ENST00000545308 BROXQ5VW32 411 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 BICRALQ6AI39 1079 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 LIPIQ6XZB0 460 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 C11orf74Q86VG3 221 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 CMIPQ8IY22 773 aa5.37□□□□□ -1.55
SNHG1-222ENST00000545308 EFHBQ8N7U6 833 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms