RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 PCDHA2Q9Y5H9 948 aa16.1■□□□□ 0.17
DDX11-228ENST00000545115 IGSF9BQ9UPX0 1349 aa16.1■□□□□ 0.17
DDX11-228ENST00000545115 SMIM35A0A1B0GVV1 85 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 GRXCR2A6NFK2 248 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 NCK2O43639 380 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 CDC45O75419 566 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 DGKIO75912 1065 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 CDC27P30260 824 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 ZNF76P36508 570 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 TMEM62Q0P6H9 643 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 EP400NLQ6ZTU2 488 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 NIPA1Q7RTP0 329 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 SKAP1Q86WV1 359 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 LINC01599Q8WXQ3 324 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 FAM217BQ9NTX9 383 aaPredicted RBP16.09■□□□□ 0.17
DDX11-228ENST00000545115 TMEM260Q9NX78 707 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 KDM3AQ9Y4C1 1321 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 TTC3P53804 2025 aa16.09■□□□□ 0.17
DDX11-228ENST00000545115 IGKV6D-21A0A0A0MT36 114 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 PI4K2BG5E9Z4 385 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 BACH1O14867 736 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 GRM6O15303 877 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 GPR37L1O60883 481 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 SSTR3P32745 418 aaPredicted RBP16.08■□□□□ 0.16
DDX11-228ENST00000545115 METAP2P50579 478 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDX11-228ENST00000545115 FGD1P98174 961 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 PAK2Q13177 524 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 FAM160B1Q5W0V3 765 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 MTHFD1LQ6UB35 978 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 NPAS4Q8IUM7 802 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 NME8Q8N427 588 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 PLVAPQ9BX97 442 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 CELF4Q9BZC1 486 aaKnown RBP16.08■□□□□ 0.16
DDX11-228ENST00000545115 CLDND1Q9NY35 253 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 NAP1L2Q9ULW6 460 aaPredicted RBP16.08■□□□□ 0.16
DDX11-228ENST00000545115 PADI3Q9ULW8 664 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 FAM50BQ9Y247 325 aa16.08■□□□□ 0.16
DDX11-228ENST00000545115 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 FAM86B1E9PN63 330 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 DDX39AO00148 427 aaKnown RBP16.07■□□□□ 0.16
DDX11-228ENST00000545115 HBP1O60381 514 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 CCNE2O96020 404 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 FAM86B2P0C5J1 330 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 STAG3L1P0CL83 205 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 PLA2G5P39877 138 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 KRT76Q01546 638 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 PFKFB3Q16875 520 aaPredicted RBP16.07■□□□□ 0.16
DDX11-228ENST00000545115 ABHD15Q6UXT9 468 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 RTN4RL1Q86UN2 441 aaPredicted RBP16.07■□□□□ 0.16
DDX11-228ENST00000545115 PLA2G4DQ86XP0 818 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 CMTR2Q8IYT2 770 aaKnown RBP16.07■□□□□ 0.16
DDX11-228ENST00000545115 CRIPAKQ8N1N5 446 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 ATP8B4Q8TF62 1192 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 P2RX5Q93086 422 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 C11orf16Q9NQ32 467 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 HCN4Q9Y3Q4 1203 aa16.07■□□□□ 0.16
DDX11-228ENST00000545115 COL1A2P08123 1366 aa16.06■□□□□ 0.16
DDX11-228ENST00000545115 ESYT2A0FGR8 921 aa16.06■□□□□ 0.16
DDX11-228ENST00000545115 MMP1P03956 469 aa16.06■□□□□ 0.16
DDX11-228ENST00000545115 CYP3A4P08684 503 aa16.06■□□□□ 0.16
DDX11-228ENST00000545115 SCG2P13521 617 aa16.06■□□□□ 0.16
DDX11-228ENST00000545115 ADD1P35611 737 aaKnown RBP16.06■□□□□ 0.16
DDX11-228ENST00000545115 JAKMIP3Q5VZ66 844 aa16.06■□□□□ 0.16
DDX11-228ENST00000545115 MCTP2Q6DN12 878 aa16.06■□□□□ 0.16
DDX11-228ENST00000545115 MIS18BP1Q6P0N0 1132 aa16.06■□□□□ 0.16
DDX11-228ENST00000545115 CCDC60Q8IWA6 550 aaPredicted RBP16.06■□□□□ 0.16
DDX11-228ENST00000545115 CCDC12Q8WUD4 166 aaPredicted RBP16.06■□□□□ 0.16
DDX11-228ENST00000545115 CRYGNQ8WXF5 182 aa16.06■□□□□ 0.16
DDX11-228ENST00000545115 FAM122AQ96E09 287 aa16.06■□□□□ 0.16
DDX11-228ENST00000545115 ZMYND12Q9H0C1 365 aa16.06■□□□□ 0.16
DDX11-228ENST00000545115 ZNF302Q9NR11 478 aa16.06■□□□□ 0.16
DDX11-228ENST00000545115 MRPL42Q9Y6G3 142 aaKnown RBP16.06■□□□□ 0.16
DDX11-228ENST00000545115 IGLV3-22A0A075B6J6 115 aa16.05■□□□□ 0.16
DDX11-228ENST00000545115 IPO5O00410 1097 aaKnown RBP16.05■□□□□ 0.16
DDX11-228ENST00000545115 DHX15O43143 795 aaKnown RBP16.05■□□□□ 0.16
DDX11-228ENST00000545115 KLRC1P26715 233 aa16.05■□□□□ 0.16
DDX11-228ENST00000545115 SETQ01105 290 aaPredicted RBP16.05■□□□□ 0.16
DDX11-228ENST00000545115 APOBRQ0VD83 1088 aa16.05■□□□□ 0.16
DDX11-228ENST00000545115 CTC1Q2NKJ3 1217 aa16.05■□□□□ 0.16
DDX11-228ENST00000545115 NAALADL2Q58DX5 795 aa16.05■□□□□ 0.16
DDX11-228ENST00000545115 PDXDC2PQ6P474 469 aa16.05■□□□□ 0.16
DDX11-228ENST00000545115 FAM43BQ6ZT52 329 aaPredicted RBP16.05■□□□□ 0.16
DDX11-228ENST00000545115 C6orf50Q9HD87 102 aa16.05■□□□□ 0.16
DDX11-228ENST00000545115 ALG13Q9NP73 1137 aaKnown RBP16.05■□□□□ 0.16
DDX11-228ENST00000545115 PRKAG3Q9UGI9 489 aa16.05■□□□□ 0.16
DDX11-228ENST00000545115 PLAGL2Q9UPG8 496 aa16.05■□□□□ 0.16
DDX11-228ENST00000545115 GINS2Q9Y248 185 aa16.05■□□□□ 0.16
DDX11-228ENST00000545115 ARIH1Q9Y4X5 557 aaPredicted RBP16.05■□□□□ 0.16
DDX11-228ENST00000545115 NID2Q14112 1375 aa16.04■□□□□ 0.16
DDX11-228ENST00000545115 FAM86C2PA6NEL3 165 aa16.04■□□□□ 0.16
DDX11-228ENST00000545115 CSPG5O95196 566 aa16.04■□□□□ 0.16
DDX11-228ENST00000545115 CPA1P15085 419 aa16.04■□□□□ 0.16
DDX11-228ENST00000545115 LTBRP36941 435 aa16.04■□□□□ 0.16
DDX11-228ENST00000545115 HYAL1Q12794 435 aa16.04■□□□□ 0.16
DDX11-228ENST00000545115 NFX1Q12986 1120 aaKnown RBP16.04■□□□□ 0.16
DDX11-228ENST00000545115 TMEM266Q2M3C6 531 aa16.04■□□□□ 0.16
DDX11-228ENST00000545115 PAN2Q504Q3 1202 aaKnown RBP16.04■□□□□ 0.16
DDX11-228ENST00000545115 ZNF484Q5JVG2 852 aa16.04■□□□□ 0.16
DDX11-228ENST00000545115 SWSAP1Q6NVH7 229 aa16.04■□□□□ 0.16
DDX11-228ENST00000545115 Q6ZUG5 572 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms