RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 LMBR1Q8WVP7 490 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 DBNDD1Q9H9R9 158 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 TFR2Q9UP52 801 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 OPLAHO14841 1288 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 ZNF185O15231 689 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 OPA1O60313 960 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 TBC1D12O60347 775 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 RNF40O75150 1001 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 NR3C1P04150 777 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 PPFIA1Q13136 1202 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 RAPGEF1Q13905 1077 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 PPP2R5AQ15172 486 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 C8orf74Q6P047 294 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 NELFCDQ8IXH7 590 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 IFT20Q8IY31 132 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 SAMD3Q8N6K7 520 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 SLC5A5Q92911 643 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 PBKQ96KB5 322 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 SPAG5Q96R06 1193 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 EIF2AK1Q9BQI3 630 aaKnown RBP13.66□□□□□ -0.22
PAAF1-215ENST00000544909 SUGCTQ9HAC7 445 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 NLRC4Q9NPP4 1024 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 PRR12Q9ULL5 1215 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 NENFQ9UMX5 172 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 FAN1Q9Y2M0 1017 aa13.66□□□□□ -0.22
PAAF1-215ENST00000544909 ASTN1O14525 1302 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 GOLGA6BA6NDN3 693 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 GOLGA8KD6RF30 607 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 PSMD10O75832 226 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 SYF2O95926 243 aaKnown RBP13.65□□□□□ -0.22
PAAF1-215ENST00000544909 BCRP11274 1271 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 FERP16591 822 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 TNNT3P45378 269 aaPredicted RBP13.65□□□□□ -0.22
PAAF1-215ENST00000544909 LMAN1P49257 510 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 RBM5P52756 815 aaKnown RBP eCLIP13.65□□□□□ -0.22
PAAF1-215ENST00000544909 JAM2P57087 298 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 TCP10Q12799 353 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 PABPC4Q13310 644 aaKnown RBP eCLIP13.65□□□□□ -0.227e-6■■□□□ 14.2
PAAF1-215ENST00000544909 EPHA7Q15375 998 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 CLUL1Q15846 466 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 KIAA0753Q2KHM9 967 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 IRF2BP2Q7Z5L9 587 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 SLC9A9Q8IVB4 645 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 SYCE1Q8N0S2 351 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 AFAP1L1Q8TED9 768 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 C7orf43Q8WVR3 580 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 TBC1D5Q92609 795 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 SLC35C1Q96A29 364 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 INPP4AQ96PE3 977 aaPredicted RBP13.65□□□□□ -0.22
PAAF1-215ENST00000544909 SH3GL2Q99962 352 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 FGFBP2Q9BYJ0 223 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 VPS33BQ9H267 617 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 RANBP17Q9H2T7 1088 aaKnown RBP13.65□□□□□ -0.22
PAAF1-215ENST00000544909 MRPL11Q9Y3B7 192 aaKnown RBP13.65□□□□□ -0.22
PAAF1-215ENST00000544909 SLX4Q8IY92 1834 aa13.65□□□□□ -0.22
PAAF1-215ENST00000544909 A0A087X0T9 212 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 GH2P01242 217 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 FAM228BP0C875 321 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 MAPTP10636 758 aaKnown RBP13.64□□□□□ -0.23
PAAF1-215ENST00000544909 PON1P27169 355 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 PSMC2P35998 433 aaKnown RBP13.64□□□□□ -0.23
PAAF1-215ENST00000544909 STAT3P40763 770 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 TNNC1P63316 161 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 GHRHRQ02643 423 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 C2orf54Q08AI8 447 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 IKQ13123 557 aaPredicted RBP13.64□□□□□ -0.23
PAAF1-215ENST00000544909 PAK2Q13177 524 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 NFRKBQ6P4R8 1299 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 OTOP1Q7RTM1 612 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 NIPA1Q7RTP0 329 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 BORCS6Q96GS4 357 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 NACC1Q96RE7 527 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 CSRNP1Q96S65 589 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 P2RX7Q99572 595 aaKnown RBP13.64□□□□□ -0.23
PAAF1-215ENST00000544909 RIT2Q99578 217 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 BHMT2Q9H2M3 363 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 PARVGQ9HBI0 331 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 GDF3Q9NR23 364 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 SALL4Q9UJQ4 1053 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 PNMA2Q9UL42 364 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 MYH10P35580 1976 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 SHTN1A0MZ66 631 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 ERICH4A6NGS2 130 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 GCOM1H8Y6P7 765 aaPredicted RBP13.64□□□□□ -0.23
PAAF1-215ENST00000544909 SHOX2O60902 331 aaPredicted RBP13.64□□□□□ -0.23
PAAF1-215ENST00000544909 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 CAPN2P17655 700 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 GUCY2CP25092 1073 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 HOXD13P35453 343 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 ZNF76P36508 570 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 HNRNPH2P55795 449 aaKnown RBP13.64□□□□□ -0.23
PAAF1-215ENST00000544909 SNRPFP62306 86 aaKnown RBP13.64□□□□□ -0.23
PAAF1-215ENST00000544909 RINT1Q6NUQ1 792 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 C1orf186Q6ZWK4 172 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 HS2ST1Q7LGA3 356 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 ACTRT1Q8TDG2 376 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 WHAMMQ8TF30 809 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 FAM151AQ8WW52 585 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 FAM204AQ9H8W3 233 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms