RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 SCAPQ12770 1279 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 MFSD10Q14728 455 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 DGKDQ16760 1214 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 KIAA0753Q2KHM9 967 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 TKFCQ3LXA3 575 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 SPOUT1Q5T280 376 aaKnown RBP8.22□□□□□ -1.09
CIT-215ENST00000544800 RSPO2Q6UXX9 243 aaPredicted RBP8.22□□□□□ -1.09
CIT-215ENST00000544800 TMC7Q7Z402 723 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 GPR149Q86SP6 731 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 FAM160A2Q8N612 972 aaPredicted RBP8.22□□□□□ -1.09
CIT-215ENST00000544800 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.22□□□□□ -1.09
CIT-215ENST00000544800 MRPS27Q92552 414 aaKnown RBP8.22□□□□□ -1.09
CIT-215ENST00000544800 KIFC2Q96AC6 838 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 XAGE2Q96GT9 111 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 ARRDC1-AS1Q9H2J1 176 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 CCDC86Q9H6F5 360 aaKnown RBP8.22□□□□□ -1.09
CIT-215ENST00000544800 KANSL2Q9H9L4 492 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 RNF146Q9NTX7 359 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 EPS15L1Q9UBC2 864 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 TTC3P53804 2025 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 AXIN1O15169 862 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 CLASP2O75122 1294 aaKnown RBP8.21□□□□□ -1.1
CIT-215ENST00000544800 CYP2E1P05181 493 aaPredicted RBP8.21□□□□□ -1.1
CIT-215ENST00000544800 CTSHP09668 335 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 STAG3L1P0CL83 205 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 AKR1B1P15121 316 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 PLCB3Q01970 1234 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 MTAPQ13126 283 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 SNW1Q13573 536 aaKnown RBP8.21□□□□□ -1.1
CIT-215ENST00000544800 LETM2Q2VYF4 491 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 TMC5Q6UXY8 1006 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 NPAS4Q8IUM7 802 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 MRPL43Q8N983 215 aaKnown RBP8.21□□□□□ -1.1
CIT-215ENST00000544800 LOXL4Q96JB6 756 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 CCDC17Q96LX7 622 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 TRERF1Q96PN7 1200 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 NUP88Q99567 741 aaPredicted RBP8.21□□□□□ -1.1
CIT-215ENST00000544800 LTB4R2Q9NPC1 389 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 SWAP70Q9UH65 585 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 RAXQ9Y2V3 346 aa8.21□□□□□ -1.1
CIT-215ENST00000544800 FOCADQ5VW36 1801 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 PATJQ8NI35 1801 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 SDK1Q7Z5N4 2213 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 C4orf47A7E2U8 309 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 H0Y626 953 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 N4BP1O75113 896 aaKnown RBP8.2□□□□□ -1.1
CIT-215ENST00000544800 TRIM16O95361 564 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 GBP2P32456 591 aaPredicted RBP8.2□□□□□ -1.1
CIT-215ENST00000544800 RDXP35241 583 aaKnown RBP8.2□□□□□ -1.1
CIT-215ENST00000544800 ALDH5A1P51649 535 aaPredicted RBP8.2□□□□□ -1.1
CIT-215ENST00000544800 HIC1Q14526 733 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 MLF2Q15773 248 aaPredicted RBP8.2□□□□□ -1.1
CIT-215ENST00000544800 SLC44A4Q53GD3 710 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 FAM26DQ5JW98 314 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 COLEC12Q5KU26 742 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 ATP6V0A1Q93050 837 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 USP26Q9BXU7 913 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 CCDC8Q9H0W5 538 aaPredicted RBP8.2□□□□□ -1.1
CIT-215ENST00000544800 FEM1BQ9UK73 627 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 AKAP2Q9Y2D5 859 aa8.2□□□□□ -1.1
CIT-215ENST00000544800 PLXNA4Q9HCM2 1894 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 SHROOM3Q8TF72 1996 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 C2orf71A6NGG8 1288 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 F2P00734 622 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 GH1P01241 217 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 ARID4AP29374 1257 aaPredicted RBP8.19□□□□□ -1.1
CIT-215ENST00000544800 FGD1P98174 961 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 CFHR1Q03591 330 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 SMC1AQ14683 1233 aaKnown RBP8.19□□□□□ -1.1
CIT-215ENST00000544800 PLA2G2CQ5R387 149 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 CEP68Q76N32 757 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 CABP7Q86V35 215 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 COLGALT1Q8NBJ5 622 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 SLC4A5Q9BY07 1137 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 PCGF6Q9BYE7 350 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 RELNP78509 3460 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 MYH1P12882 1939 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 MIA3Q5JRA6 1907 aa8.19□□□□□ -1.1
CIT-215ENST00000544800 C17orf102A2RUQ5 167 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 ALAS1P13196 640 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 GPC5P78333 572 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 KRT17Q04695 432 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 KLRC3Q07444 240 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 PDE4DQ08499 809 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 GORABQ5T7V8 394 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 NSMFQ6X4W1 530 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 STAMQ92783 540 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 GLG1Q92896 1179 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 MPHOSPH6Q99547 160 aaKnown RBP8.18□□□□□ -1.1
CIT-215ENST00000544800 EHMT1Q9H9B1 1298 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 SFXN1Q9H9B4 322 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 GPCPD1Q9NPB8 672 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 FAM217BQ9NTX9 383 aaPredicted RBP8.18□□□□□ -1.1
CIT-215ENST00000544800 CACNA1FO60840 1977 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 LAMA1P25391 3075 aa8.18□□□□□ -1.1
CIT-215ENST00000544800 SHISA7A6NL88 538 aa8.17□□□□□ -1.1
CIT-215ENST00000544800 ANHXE9PGG2 379 aa8.17□□□□□ -1.1
CIT-215ENST00000544800 EPN2O95208 641 aa8.17□□□□□ -1.1
CIT-215ENST00000544800 GP1BBP13224 206 aa8.17□□□□□ -1.1
CIT-215ENST00000544800 CD72P21854 359 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms