RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 REPS2Q8NFH8 660 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 CAGE1Q8TC20 777 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 AFAP1L1Q8TED9 768 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 ANKS1AQ92625 1134 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 MRRFQ96E11 262 aaKnown RBP4.9□□□□□ -1.63
SNHG1-220ENST00000544550 ZNF837Q96EG3 531 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-220ENST00000544550 ZNF512BQ96KM6 892 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-220ENST00000544550 CCDC17Q96LX7 622 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 SPOCK3Q9BQ16 436 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 SLF1Q9BQI6 1058 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 FSD1Q9BTV5 496 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 TRMT13Q9NUP7 481 aaKnown RBP4.9□□□□□ -1.63
SNHG1-220ENST00000544550 FAM86C1Q9NVL1 165 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 CLDND1Q9NY35 253 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 HCN2Q9UL51 889 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 INSL6Q9Y581 213 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 ASTN1O14525 1302 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 RAD50Q92878 1312 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 BDP1A6H8Y1 2624 aa4.9□□□□□ -1.63
SNHG1-220ENST00000544550 PNMA6FA0A0J9YX94 578 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 STXBP3O00186 592 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 EIF1AYO14602 144 aaKnown RBP4.89□□□□□ -1.63
SNHG1-220ENST00000544550 KHNYNO15037 678 aaKnown RBP4.89□□□□□ -1.63
SNHG1-220ENST00000544550 KPNA6O60684 536 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 IDH1O75874 414 aaKnown RBP4.89□□□□□ -1.63
SNHG1-220ENST00000544550 VAMP1P23763 118 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 AVPR2P30518 371 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 NBL1P41271 181 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 PSMC6P62333 389 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 SIGLEC14Q08ET2 396 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 DDX10Q13206 875 aaKnown RBP4.89□□□□□ -1.63
SNHG1-220ENST00000544550 G3BP1Q13283 466 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNHG1-220ENST00000544550 MTX1Q13505 466 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 TCEAL5Q5H9L2 206 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 ALG1LQ6GMV1 187 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 AMOTL1Q8IY63 956 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 PRPF38AQ8NAV1 312 aaKnown RBP4.89□□□□□ -1.63
SNHG1-220ENST00000544550 SNX29Q8TEQ0 813 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNHG1-220ENST00000544550 NKD2Q969F2 451 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-220ENST00000544550 MTG1Q9BT17 334 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-220ENST00000544550 CRNKL1Q9BZJ0 848 aaKnown RBP4.89□□□□□ -1.63
SNHG1-220ENST00000544550 GSX2Q9BZM3 304 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 KATNBL1Q9H079 304 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 KANSL2Q9H9L4 492 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 GPR108Q9NPR9 543 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 ENAMQ9NRM1 1142 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 FBXO28Q9NVF7 368 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 MCM9Q9NXL9 1143 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 TMEM63CQ9P1W3 806 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 FOXD3Q9UJU5 478 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-220ENST00000544550 DNAH12Q6ZR08 3092 aa4.89□□□□□ -1.63
SNHG1-220ENST00000544550 DCDC2BA2VCK2 349 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 H0Y858 1186 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 H3BNC9 293 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 MBTPS2O43462 519 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 CPNE3O75131 537 aaKnown RBP4.88□□□□□ -1.63
SNHG1-220ENST00000544550 CXCL10P02778 98 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 AMHP03971 560 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 GNAI3P08754 354 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 EEF2P13639 858 aaKnown RBP4.88□□□□□ -1.63
SNHG1-220ENST00000544550 SELPP16109 830 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 DEFB103AP81534 67 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 PURAQ00577 322 aaKnown RBP4.88□□□□□ -1.63
SNHG1-220ENST00000544550 GPM6BQ13491 265 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 CCINQ13939 588 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 IKBKEQ14164 716 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 PLA2G4EQ3MJ16 856 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 DUSP28Q4G0W2 176 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 EPC2Q52LR7 807 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 FAM47CQ5HY64 1035 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 FAM83BQ5T0W9 1011 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 ASCL5Q7RTU5 278 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 DGLUCYQ7Z3D6 616 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 SPRED2Q7Z698 418 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 RPAINQ86UA6 219 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 SIAH1Q8IUQ4 282 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 CPXCR1Q8N123 301 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 FBF1Q8TES7 1133 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 NANOS1Q8WY41 292 aaKnown RBP4.88□□□□□ -1.63
SNHG1-220ENST00000544550 PPP2R3CQ969Q6 453 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 DUSP9Q99956 384 aaKnown RBP4.88□□□□□ -1.63
SNHG1-220ENST00000544550 C17orf80Q9BSJ5 609 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 LMAN2LQ9H0V9 348 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 CHRDQ9H2X0 955 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 ACAD9Q9H845 621 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 VTA1Q9NP79 307 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 TLR9Q9NR96 1032 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 SMC4Q9NTJ3 1288 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 MARK1Q9P0L2 795 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 PARP2Q9UGN5 583 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 CD207Q9UJ71 328 aa4.88□□□□□ -1.63
SNHG1-220ENST00000544550 ATXN7L1Q9ULK2 861 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-220ENST00000544550 COL4A4P53420 1690 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-220ENST00000544550 LOC102724159A0A0B4J2E5 919 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 NKRFO15226 690 aaKnown RBP eCLIP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 PHACTR2O75167 634 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 SASH3O75995 380 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 KRT37O76014 449 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms