RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CYFIP1Q7L576 1253 aa15.13■□□□□ 0.01
HCFC2-202ENST00000544223 NACC1Q96RE7 527 aa15.13■□□□□ 0.01
HCFC2-202ENST00000544223 CHP1Q99653 195 aa15.13■□□□□ 0.01
HCFC2-202ENST00000544223 FAM207AQ9NSI2 230 aaPredicted RBP15.13■□□□□ 0.01
HCFC2-202ENST00000544223 RBPJLQ9UBG7 517 aa15.13■□□□□ 0.01
HCFC2-202ENST00000544223 TCEAL9Q9UHQ7 104 aa15.13■□□□□ 0.01
HCFC2-202ENST00000544223 ARHGEF35A5YM69 484 aa15.13■□□□□ 0.01
HCFC2-202ENST00000544223 SPAG1Q07617 926 aa15.13■□□□□ 0.01
HCFC2-202ENST00000544223 PSMD2Q13200 908 aa15.13■□□□□ 0.01
HCFC2-202ENST00000544223 PADI6Q6TGC4 694 aa15.13■□□□□ 0.01
HCFC2-202ENST00000544223 KIFC3Q9BVG8 833 aa15.13■□□□□ 0.01
HCFC2-202ENST00000544223 SOWAHBA6NEL2 793 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 P4HBP07237 508 aaKnown RBP15.12■□□□□ 0.01
HCFC2-202ENST00000544223 KCNA2P16389 499 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 YWHABP31946 246 aaKnown RBP15.12■□□□□ 0.01
HCFC2-202ENST00000544223 KRT9P35527 623 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 OAZ1P54368 228 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 ADAM9Q13443 819 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 ODR4Q5SWX8 454 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 GPAT2Q6NUI2 795 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 SWSAP1Q6NVH7 229 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 SLC10A4Q96EP9 437 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 IRX2Q9BZI1 471 aaPredicted RBP15.12■□□□□ 0.01
HCFC2-202ENST00000544223 GABBR1Q9UBS5 961 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 ATP2A1O14983 1001 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 ZNF862O60290 1169 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 NR2F2P24468 414 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 QARSP47897 775 aaKnown RBP15.12■□□□□ 0.01
HCFC2-202ENST00000544223 ERVK-24P63145 666 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 CCDC40Q4G0X9 1142 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 NLRX1Q86UT6 975 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 NOC3LQ8WTT2 800 aaKnown RBP15.12■□□□□ 0.01
HCFC2-202ENST00000544223 ZC3H15Q8WU90 426 aaKnown RBP15.12■□□□□ 0.01
HCFC2-202ENST00000544223 INPP4AQ96PE3 977 aaPredicted RBP15.12■□□□□ 0.01
HCFC2-202ENST00000544223 PORCNQ9H237 461 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 USP20Q9Y2K6 914 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 WDR81Q562E7 1941 aa15.12■□□□□ 0.01
HCFC2-202ENST00000544223 FAM170AA1A519 330 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 FDX1P10109 184 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 RARRES1P49788 294 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 MAPK7Q13164 816 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 ANO5Q75V66 913 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 ZSWIM2Q8NEG5 633 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 FIZ1Q96SL8 496 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 NDST4Q9H3R1 872 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 ZSWIM4Q9H7M6 989 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 ABHD10Q9NUJ1 306 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 FANCGO15287 622 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 TRIM21P19474 475 aaKnown RBP15.11■□□□□ 0.01
HCFC2-202ENST00000544223 COBLL1Q53SF7 1204 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 CCDC60Q8IWA6 550 aaPredicted RBP15.11■□□□□ 0.01
HCFC2-202ENST00000544223 RDH13Q8NBN7 331 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 ACRBPQ8NEB7 543 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 TSG101Q99816 390 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 EFCC1Q9HA90 598 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 PARVGQ9HBI0 331 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 AGTPBP1Q9UPW5 1226 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 ZMYM2Q9UBW7 1377 aa15.11■□□□□ 0.01
HCFC2-202ENST00000544223 HOXA7P31268 230 aaPredicted RBP15.1■□□□□ 0.01
HCFC2-202ENST00000544223 FKBP3Q00688 224 aaKnown RBP15.1■□□□□ 0.01
HCFC2-202ENST00000544223 LRRC63Q05C16 580 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 LY6KQ17RY6 165 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 KNOP1Q1ED39 458 aaKnown RBP15.1■□□□□ 0.01
HCFC2-202ENST00000544223 VWA3BQ502W6 1294 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 EPM2AIP1Q7L775 607 aaPredicted RBP15.1■□□□□ 0.01
HCFC2-202ENST00000544223 ARMC9Q7Z3E5 817 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 MMRN2Q9H8L6 949 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 NMRK2Q9NPI5 230 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 TBC1D22BQ9NU19 505 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 COL4A3BPQ9Y5P4 624 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 IQCA1LA6NCM1 817 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 TGFB1I1O43294 461 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 ALDH5A1P51649 535 aaPredicted RBP15.1■□□□□ 0.01
HCFC2-202ENST00000544223 PPIL2Q13356 520 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 XKR9Q5GH70 373 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 PROCA1Q8NCQ7 364 aaPredicted RBP15.1■□□□□ 0.01
HCFC2-202ENST00000544223 PPP2R2CQ9Y2T4 447 aa15.1■□□□□ 0.01
HCFC2-202ENST00000544223 WDR64B1ANS9 1081 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 POTEB2H3BUK9 544 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 AKAP3O75969 853 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 PTPN14Q15678 1187 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 NIPA1Q7RTP0 329 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 REXO1L1PQ8IX06 675 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 FAM178BQ8IXR5 827 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 ANKRD13CQ8N6S4 541 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 JPH1Q9HDC5 661 aaPredicted RBP15.09■□□□□ 0.01
HCFC2-202ENST00000544223 LZTFL1Q9NQ48 299 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 MAP3K20Q9NYL2 800 aaKnown RBP15.09■□□□□ 0.01
HCFC2-202ENST00000544223 KCNH4Q9UQ05 1017 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 PCDHB13Q9Y5F0 798 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 LOC285556D6RIA3 1793 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 PLEKP08567 350 aaPredicted RBP15.09■□□□□ 0.01
HCFC2-202ENST00000544223 DNM2P50570 870 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 CYP2J2P51589 502 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 LDLRAD1Q5T700 205 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 FAM102BQ5T8I3 360 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 SYT10Q6XYQ8 523 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 NYAP1Q6ZVC0 841 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 RIOX2Q8IUF8 465 aa15.09■□□□□ 0.01
HCFC2-202ENST00000544223 CCDC43Q96MW1 224 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms