RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 PLA2G6O60733 806 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 LILRB3O75022 631 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 PPFIA4O75335 1185 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 F2P00734 622 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 NPR3P17342 541 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 EIF2AK2P19525 551 aaKnown RBP5.59□□□□□ -1.51
LIMS1-214ENST00000542845 SDHBP21912 280 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 EDNRBP24530 442 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 USP46P62068 366 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 ARHGAP4P98171 946 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 PDE4CQ08493 712 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 UBE3CQ15386 1083 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 DUSP6Q16828 381 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 TUSC1Q2TAM9 212 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 HSDL1Q3SXM5 330 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 NAALADL2Q58DX5 795 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 ARHGEF16Q5VV41 709 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 KANK3Q6NY19 840 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 SYCE2Q6PIF2 218 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 THNSL1Q8IYQ7 743 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 C12orf76Q8N812 135 aaPredicted RBP5.59□□□□□ -1.51
LIMS1-214ENST00000542845 TDRD5Q8NAT2 981 aaKnown RBP5.59□□□□□ -1.51
LIMS1-214ENST00000542845 PPTC7Q8NI37 304 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 ATP8B4Q8TF62 1192 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 TUT1Q9H6E5 874 aaKnown RBP5.59□□□□□ -1.51
LIMS1-214ENST00000542845 MLXIPQ9HAP2 919 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 ERVK-5Q9HDB9 667 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 ENTPD7Q9NQZ7 604 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 DBR1Q9UK59 544 aaKnown RBP5.59□□□□□ -1.51
LIMS1-214ENST00000542845 CDV3Q9UKY7 258 aaKnown RBP5.59□□□□□ -1.51
LIMS1-214ENST00000542845 SYNPO2Q9UMS6 1093 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 PCDHB12Q9Y5F1 795 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 CACNA1HO95180 2353 aa5.59□□□□□ -1.51
LIMS1-214ENST00000542845 HOXA2O43364 376 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 RANBP6O60518 1105 aaKnown RBP5.58□□□□□ -1.52
LIMS1-214ENST00000542845 FGF18O76093 207 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 GGPS1O95749 300 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 CHRNA1P02708 482 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 DCNP07585 359 aaKnown RBP5.58□□□□□ -1.52
LIMS1-214ENST00000542845 SLC3A2P08195 630 aaKnown RBP5.58□□□□□ -1.52
LIMS1-214ENST00000542845 CFHP08603 1231 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 SP9P0CG40 484 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 STAG3L1P0CL83 205 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 GNAT1P11488 350 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 CTDSPL2Q05D32 466 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 DMWDQ09019 674 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 LPIN1Q14693 890 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 PROX2Q3B8N5 592 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 RARS2Q5T160 578 aaKnown RBP5.58□□□□□ -1.52
LIMS1-214ENST00000542845 UTP14CQ5TAP6 766 aaKnown RBP5.58□□□□□ -1.52
LIMS1-214ENST00000542845 ZC3H14Q6PJT7 736 aaKnown RBP5.58□□□□□ -1.52
LIMS1-214ENST00000542845 ITPRIPQ8IWB1 547 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 CMTR2Q8IYT2 770 aaKnown RBP5.58□□□□□ -1.52
LIMS1-214ENST00000542845 IFNL3Q8IZI9 196 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 NSUN6Q8TEA1 469 aaKnown RBP5.58□□□□□ -1.52
LIMS1-214ENST00000542845 DCAF4Q8WV16 495 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 RMDN3Q96TC7 470 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 CDCA3Q99618 268 aaPredicted RBP5.58□□□□□ -1.52
LIMS1-214ENST00000542845 C16orf70Q9BSU1 422 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 EPB41L4AQ9HCS5 686 aaPredicted RBP5.58□□□□□ -1.52
LIMS1-214ENST00000542845 AAASQ9NRG9 546 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 TOMM22Q9NS69 142 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 CA14Q9ULX7 337 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 USP18Q9UMW8 372 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 VPS13AQ96RL7 3174 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 LOXHD1Q8IVV2 1947 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 DMXL1Q9Y485 3027 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 DOCK5Q9H7D0 1870 aa5.58□□□□□ -1.52
LIMS1-214ENST00000542845 TBKBP1A7MCY6 615 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 HIDE1A8MVS5 230 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 NOP56O00567 594 aaKnown RBP5.57□□□□□ -1.52
LIMS1-214ENST00000542845 NARSO43776 548 aaKnown RBP5.57□□□□□ -1.52
LIMS1-214ENST00000542845 KINO60870 393 aaKnown RBP5.57□□□□□ -1.52
LIMS1-214ENST00000542845 EIF3JO75822 258 aaKnown RBP5.57□□□□□ -1.52
LIMS1-214ENST00000542845 CFBP00751 764 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 NR3C2P08235 984 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 ADRB1P08588 477 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 GOLGA8HP0CJ92 632 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 HOXB8P17481 243 aaPredicted RBP5.57□□□□□ -1.52
LIMS1-214ENST00000542845 CD52P31358 61 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 MTHFRP42898 656 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 SP4Q02446 784 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 GUCA2AQ02747 115 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 TDGQ13569 410 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 HSP90AB4PQ58FF6 505 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 PPM1JQ5JR12 505 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 CELF3Q5SZQ8 465 aaKnown RBP5.57□□□□□ -1.52
LIMS1-214ENST00000542845 GIMAP6Q6P9H5 292 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 RUFY4Q6ZNE9 571 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 TMC7Q7Z402 723 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 RTN4RL1Q86UN2 441 aaPredicted RBP5.57□□□□□ -1.52
LIMS1-214ENST00000542845 TMEM87AQ8NBN3 555 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 SYTL5Q8TDW5 730 aaPredicted RBP5.57□□□□□ -1.52
LIMS1-214ENST00000542845 OSBP2Q969R2 916 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 IWS1Q96ST2 819 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 TCF25Q9BQ70 676 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 UBA5Q9GZZ9 404 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 GZF1Q9H116 711 aaPredicted RBP5.57□□□□□ -1.52
LIMS1-214ENST00000542845 CPVLQ9H3G5 476 aa5.57□□□□□ -1.52
LIMS1-214ENST00000542845 BCAS3Q9H6U6 928 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms