RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 GTF3C2Q8WUA4 911 aaPredicted RBP12.22□□□□□ -0.45
SCG3-202ENST00000542355 DUSP9Q99956 384 aaKnown RBP12.22□□□□□ -0.45
SCG3-202ENST00000542355 ZKSCAN5Q9Y2L8 839 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 TELO2Q9Y4R8 837 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 ARHGEF35A5YM69 484 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 KCNJ18B7U540 433 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 KCNJ12Q14500 433 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 NR1I3Q14994 352 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 UGCGQ16739 394 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 TCP11X2Q5H9J9 407 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 IRF2BP1Q8IU81 584 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 CTAGE1Q96RT6 745 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 JPH1Q9HDC5 661 aaPredicted RBP12.22□□□□□ -0.45
SCG3-202ENST00000542355 PCDHA10Q9Y5I2 948 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 LRRC10BA6NIK2 292 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 TBCAO75347 108 aaKnown RBP12.21□□□□□ -0.45
SCG3-202ENST00000542355 EDNRBP24530 442 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 YWHABP31946 246 aaKnown RBP12.21□□□□□ -0.45
SCG3-202ENST00000542355 ZNF157P51786 506 aaPredicted RBP12.21□□□□□ -0.45
SCG3-202ENST00000542355 PSMC5P62195 406 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 CCNA1P78396 465 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 SPAG1Q07617 926 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 ARID5BQ14865 1188 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 KRT31Q15323 416 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 CYFIP1Q7L576 1253 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 SFR1Q86XK3 245 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 NELFCDQ8IXH7 590 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 PARP9Q8IXQ6 854 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 SENP7Q9BQF6 1050 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 SH2D3AQ9BRG2 576 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 KCNF1Q9H3M0 494 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 THAP9Q9H5L6 903 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 IMPACTQ9P2X3 320 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 SLC9A2Q9UBY0 812 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 COL4A3BPQ9Y5P4 624 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 A0A0G2JMZ2 1700 aa12.21□□□□□ -0.45
SCG3-202ENST00000542355 RBBP6Q7Z6E9 1792 aaKnown RBP12.21□□□□□ -0.46
SCG3-202ENST00000542355 NFASCO94856 1347 aa12.21□□□□□ -0.46
SCG3-202ENST00000542355 DNAJC25-GNG10A0A024R161 153 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 A0A1B0GTH6 734 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 TMEM150BA6NC51 233 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 B4DLN1 442 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 TEX33O43247 280 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 ICAM3P32942 547 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 FILIP1LQ4L180 1135 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 UTP14CQ5TAP6 766 aaKnown RBP12.2□□□□□ -0.46
SCG3-202ENST00000542355 C4orf19Q8IY42 314 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 SMAP1Q8IYB5 467 aaPredicted RBP12.2□□□□□ -0.46
SCG3-202ENST00000542355 SHCBP1Q8NEM2 672 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 ANKRD20A12PQ8NF67 263 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 RDM1Q8NG50 284 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 CACTINQ8WUQ7 758 aaKnown RBP12.2□□□□□ -0.46
SCG3-202ENST00000542355 SCFD1Q8WVM8 642 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 VPS16Q9H269 839 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 MAGEC2Q9UBF1 373 aaPredicted RBP12.2□□□□□ -0.46
SCG3-202ENST00000542355 GABBR1Q9UBS5 961 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 LIMA1Q9UHB6 759 aaKnown RBP12.2□□□□□ -0.46
SCG3-202ENST00000542355 FAM13AO94988 1023 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 LYPLA2O95372 231 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 GCLCP48506 637 aaPredicted RBP12.2□□□□□ -0.46
SCG3-202ENST00000542355 RARRES1P49788 294 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 CASP5P51878 434 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 ACTR2P61160 394 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 LRMPQ12912 555 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 SWSAP1Q6NVH7 229 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 PADI6Q6TGC4 694 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 MAEAQ7L5Y9 396 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 VSTM4Q8IW00 320 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 MYCT1Q8N699 235 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 NOC3LQ8WTT2 800 aaKnown RBP12.2□□□□□ -0.46
SCG3-202ENST00000542355 FGD4Q96M96 766 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 MPHOSPH6Q99547 160 aaKnown RBP12.2□□□□□ -0.46
SCG3-202ENST00000542355 MRPL44Q9H9J2 332 aaKnown RBP12.2□□□□□ -0.46
SCG3-202ENST00000542355 RRAGDQ9NQL2 400 aaPredicted RBP12.2□□□□□ -0.46
SCG3-202ENST00000542355 TAB2Q9NYJ8 693 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 KCND2Q9NZV8 630 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 DBR1Q9UK59 544 aaKnown RBP12.2□□□□□ -0.46
SCG3-202ENST00000542355 SSUH2Q9Y2M2 353 aa12.2□□□□□ -0.46
SCG3-202ENST00000542355 N4BP3O15049 544 aa12.19□□□□□ -0.46
SCG3-202ENST00000542355 PSAPP07602 524 aa12.19□□□□□ -0.46
SCG3-202ENST00000542355 LRRC8AQ8IWT6 810 aa12.19□□□□□ -0.46
SCG3-202ENST00000542355 PARK7Q99497 189 aaKnown RBP12.19□□□□□ -0.46
SCG3-202ENST00000542355 KIF20AO95235 890 aa12.19□□□□□ -0.46
SCG3-202ENST00000542355 MYBP10242 640 aa12.19□□□□□ -0.46
SCG3-202ENST00000542355 CHRM1P11229 460 aaPredicted RBP12.19□□□□□ -0.46
SCG3-202ENST00000542355 COPB1P53618 953 aaKnown RBP12.19□□□□□ -0.46
SCG3-202ENST00000542355 LRRC63Q05C16 580 aa12.19□□□□□ -0.46
SCG3-202ENST00000542355 ABHD15Q6UXT9 468 aa12.19□□□□□ -0.46
SCG3-202ENST00000542355 SAPCD2Q86UD0 394 aa12.19□□□□□ -0.46
SCG3-202ENST00000542355 RASAL3Q86YV0 1011 aa12.19□□□□□ -0.46
SCG3-202ENST00000542355 CCDC43Q96MW1 224 aaKnown RBP12.19□□□□□ -0.46
SCG3-202ENST00000542355 TSG101Q99816 390 aa12.19□□□□□ -0.46
SCG3-202ENST00000542355 PARVGQ9HBI0 331 aa12.19□□□□□ -0.46
SCG3-202ENST00000542355 HIP1RO75146 1068 aa12.18□□□□□ -0.46
SCG3-202ENST00000542355 PRPF6O94906 941 aaKnown RBP12.18□□□□□ -0.46
SCG3-202ENST00000542355 GCNT3O95395 438 aa12.18□□□□□ -0.46
SCG3-202ENST00000542355 GAP43P17677 238 aa12.18□□□□□ -0.46
SCG3-202ENST00000542355 UBA1P22314 1058 aaKnown RBP12.18□□□□□ -0.46
SCG3-202ENST00000542355 GUCY2CP25092 1073 aa12.18□□□□□ -0.46
SCG3-202ENST00000542355 EEF1GP26641 437 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms