RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 GDPD5Q8WTR4 605 aa12.94□□□□□ -0.34
VTN-203ENST00000542029 ZNF577Q9BSK1 485 aa12.94□□□□□ -0.34
VTN-203ENST00000542029 TM6SF1Q9BZW5 370 aa12.94□□□□□ -0.34
VTN-203ENST00000542029 FAM49AQ9H0Q0 323 aaPredicted RBP12.94□□□□□ -0.34
VTN-203ENST00000542029 ZSWIM6Q9HCJ5 1215 aa12.94□□□□□ -0.34
VTN-203ENST00000542029 ZNF302Q9NR11 478 aa12.94□□□□□ -0.34
VTN-203ENST00000542029 TRPV2Q9Y5S1 764 aa12.94□□□□□ -0.34
VTN-203ENST00000542029 CYP46A1Q9Y6A2 500 aa12.94□□□□□ -0.34
VTN-203ENST00000542029 TRIP12Q14669 1992 aaPredicted RBP12.94□□□□□ -0.34
VTN-203ENST00000542029 KDM3AQ9Y4C1 1321 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 IGLV3-22A0A075B6J6 115 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 ENPP3O14638 875 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 CPLX1O14810 134 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 CCNE2O96020 404 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 RB1P06400 928 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 BMP1P13497 986 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 KRT76Q01546 638 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 EPC2Q52LR7 807 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 TIGD5Q53EQ6 642 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 KRT40Q6A162 431 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 SPRED2Q7Z698 418 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 TMEM192Q8IY95 271 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 FIBCD1Q8N539 461 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 PHKBQ93100 1093 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 MRPL38Q96DV4 380 aaKnown RBP12.93□□□□□ -0.34
VTN-203ENST00000542029 ZNF274Q96GC6 653 aaPredicted RBP12.93□□□□□ -0.34
VTN-203ENST00000542029 C17orf80Q9BSJ5 609 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 SLC26A6Q9BXS9 759 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 OSBPL7Q9BZF2 842 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
VTN-203ENST00000542029 CEP131Q9UPN4 1083 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 PCDHA10Q9Y5I2 948 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 NCOR1O75376 2440 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 COL1A2P08123 1366 aa12.93□□□□□ -0.34
VTN-203ENST00000542029 H3BNC9 293 aa12.92□□□□□ -0.34
VTN-203ENST00000542029 DDX39AO00148 427 aaKnown RBP12.92□□□□□ -0.34
VTN-203ENST00000542029 DHX15O43143 795 aaKnown RBP12.92□□□□□ -0.34
VTN-203ENST00000542029 PSAPP07602 524 aa12.92□□□□□ -0.34
VTN-203ENST00000542029 STAG3L1P0CL83 205 aa12.92□□□□□ -0.34
VTN-203ENST00000542029 USP11P51784 963 aa12.92□□□□□ -0.34
VTN-203ENST00000542029 TFF2Q03403 129 aa12.92□□□□□ -0.34
VTN-203ENST00000542029 GALNT17Q6IS24 598 aa12.92□□□□□ -0.34
VTN-203ENST00000542029 MTHFD1LQ6UB35 978 aa12.92□□□□□ -0.34
VTN-203ENST00000542029 BBXQ8WY36 941 aaPredicted RBP12.92□□□□□ -0.34
VTN-203ENST00000542029 FAM167AQ96KS9 214 aa12.92□□□□□ -0.34
VTN-203ENST00000542029 CELF4Q9BZC1 486 aaKnown RBP12.92□□□□□ -0.34
VTN-203ENST00000542029 MYH7BA7E2Y1 1941 aa12.92□□□□□ -0.34
VTN-203ENST00000542029 IGSF9BQ9UPX0 1349 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 WDR64B1ANS9 1081 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 EIF5BO60841 1220 aaKnown RBP12.91□□□□□ -0.34
VTN-203ENST00000542029 DEXIO95424 95 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 KLRC1P26715 233 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 CD52P31358 61 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 NLRP5P59047 1200 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 CCT2P78371 535 aaKnown RBP12.91□□□□□ -0.34
VTN-203ENST00000542029 SSRP1Q08945 709 aaKnown RBP12.91□□□□□ -0.34
VTN-203ENST00000542029 PAK2Q13177 524 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 GPM6BQ13491 265 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 PRR16Q569H4 304 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 SWSAP1Q6NVH7 229 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 NPAS4Q8IUM7 802 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 CCDC60Q8IWA6 550 aaPredicted RBP12.91□□□□□ -0.34
VTN-203ENST00000542029 CKAP2LQ8IYA6 745 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 RIT2Q99578 217 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 C11orf84Q9BUA3 381 aaPredicted RBP12.91□□□□□ -0.34
VTN-203ENST00000542029 PLVAPQ9BX97 442 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 LMAN2LQ9H0V9 348 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 AGO3Q9H9G7 860 aaKnown RBP12.91□□□□□ -0.34
VTN-203ENST00000542029 PADI3Q9ULW8 664 aa12.91□□□□□ -0.34
VTN-203ENST00000542029 MAFBQ9Y5Q3 323 aaPredicted RBP12.91□□□□□ -0.34
VTN-203ENST00000542029 ADGRA3Q8IWK6 1321 aa12.9□□□□□ -0.34
VTN-203ENST00000542029 C5orf67F2Z3F1 127 aa12.9□□□□□ -0.34
VTN-203ENST00000542029 MAGEB2O15479 319 aa12.9□□□□□ -0.34
VTN-203ENST00000542029 NCK2O43639 380 aa12.9□□□□□ -0.34
VTN-203ENST00000542029 SFNP31947 248 aa12.9□□□□□ -0.34
VTN-203ENST00000542029 BMPR1AP36894 532 aa12.9□□□□□ -0.34
VTN-203ENST00000542029 BTG3Q14201 252 aaPredicted RBP12.9□□□□□ -0.34
VTN-203ENST00000542029 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.34
VTN-203ENST00000542029 TRAPPC12Q8WVT3 735 aa12.9□□□□□ -0.34
VTN-203ENST00000542029 UBE2ZQ9H832 354 aaPredicted RBP12.9□□□□□ -0.34
VTN-203ENST00000542029 VPS54Q9P1Q0 977 aa12.9□□□□□ -0.34
VTN-203ENST00000542029 PCDHA4Q9UN74 947 aa12.9□□□□□ -0.34
VTN-203ENST00000542029 SAMM50Q9Y512 469 aa12.9□□□□□ -0.34
VTN-203ENST00000542029 GPR182O15218 404 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 RPS6KA5O75582 802 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 DGKIO75912 1065 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 CDKL5O76039 1030 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 TMOD1P28289 359 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 CTNNB1P35222 781 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 KCNQ1P51787 676 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 TOB2Q14106 344 aaPredicted RBP12.89□□□□□ -0.35
VTN-203ENST00000542029 PUS10Q3MIT2 529 aaKnown RBP12.89□□□□□ -0.35
VTN-203ENST00000542029 NAALADL2Q58DX5 795 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 CMTR2Q8IYT2 770 aaKnown RBP12.89□□□□□ -0.35
VTN-203ENST00000542029 KIAA0319LQ8IZA0 1049 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 BANK1Q8NDB2 785 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 RDM1Q8NG50 284 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 RASGRP4Q8TDF6 673 aa12.89□□□□□ -0.35
VTN-203ENST00000542029 CLP1Q92989 425 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms