RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 ACBD3Q9H3P7 528 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 NHEJ1Q9H9Q4 299 aaPredicted RBP15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 PPP2R3BQ9Y5P8 575 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 ITIH6Q6UXX5 1313 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 CYLC1P35663 651 aaPredicted RBP15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 SPA17Q15506 151 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 WDR59Q6PJI9 974 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 CEP57Q86XR8 500 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 PTPN18Q99952 460 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 PYM1Q9BRP8 204 aaKnown RBP15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 RIOX1Q9H6W3 641 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 TXNRD2Q9NNW7 524 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 LRWD1Q9UFC0 647 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 SEC63Q9UGP8 760 aaKnown RBP15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 LAMA3Q16787 3333 aa15.76■□□□□ 0.11
SFSWAP-210ENST00000541286 LRRC10BA6NIK2 292 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 NFIBO00712 420 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 PRPF6O94906 941 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 ARID5AQ03989 594 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 GMCL1P1Q8NEA9 526 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 KIAA1683Q9H0B3 1180 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 GBP3Q9H0R5 595 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 HAUS4Q9H6D7 363 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 OPLAHO14841 1288 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 ALAS1P13196 640 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 KIF5AQ12840 1032 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 ASPRV1Q53RT3 343 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 SND1Q7KZF4 910 aaKnown RBP eCLIP15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 C4orf32Q8N8J7 132 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 C2orf69Q8N8R5 385 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 TBC1D7Q9P0N9 293 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 DOCK1Q14185 1865 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 AKR1B10O60218 316 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 RNASE9P60153 205 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 KRT83P78385 493 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 PPP2R5AQ15172 486 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 LDLRAD1Q5T700 205 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 ARL6IP4Q66PJ3 421 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 ZHX3Q9H4I2 956 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 EHD2Q9NZN4 543 aa15.75■□□□□ 0.11
SFSWAP-210ENST00000541286 PHIPQ8WWQ0 1821 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 RPS6KA5O75582 802 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 CFBP00751 764 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 DNM2P50570 870 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 WDR78Q5VTH9 848 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 GBP6Q6ZN66 633 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 SAPCD2Q86UD0 394 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 HOOK2Q96ED9 719 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 SELENOOQ9BVL4 669 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 CAPS2Q9BXY5 557 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 MLXIPQ9HAP2 919 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 MED4Q9NPJ6 270 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 AGPSO00116 658 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 NDUFAB1O14561 156 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 BACH1O14867 736 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 AOC2O75106 756 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 MMP14P50281 582 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 ERO1BQ86YB8 467 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 P2RX5Q93086 422 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 GMCL1Q96IK5 515 aa15.74■□□□□ 0.11
SFSWAP-210ENST00000541286 GOLGA6BA6NDN3 693 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 ZBTB5O15062 677 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 SORBS3O60504 671 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 Q3C1V9 767 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 TDRD12Q587J7 1177 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 CCDC155Q8N6L0 562 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 TBCKQ8TEA7 893 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 BRI3BPQ8WY22 251 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 NLRC4Q9NPP4 1024 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 SPDYE5A6NIY4 337 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 SKAP2O75563 359 aaPredicted RBP15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 OR52Z1P0C646 297 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 MOGSQ13724 837 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 PTPROQ16827 1216 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 GIMAP7Q8NHV1 300 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 DCAF4Q8WV16 495 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 ARL8AQ96BM9 186 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 SPZ1Q9BXG8 430 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 ZNF536O15090 1300 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 KLRC4O43908 158 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 MOCS3O95396 460 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 EEF1GP26641 437 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 GPATCH4Q5T3I0 446 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 TTI2Q6NXR4 508 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 RRAGAQ7L523 313 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 SUGP1Q8IWZ8 645 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 DUSP9Q99956 384 aaKnown RBP15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 BARHL2Q9NY43 387 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 BTBD7Q9P203 1132 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 CAPN11Q9UMQ6 739 aa15.73■□□□□ 0.11
SFSWAP-210ENST00000541286 BUB1O43683 1085 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 TMEM132BQ14DG7 1078 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 NONOQ15233 471 aaKnown RBP eCLIP15.72■□□□□ 0.111e-6■■■□□ 17.7
SFSWAP-210ENST00000541286 POTEDQ86YR6 584 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 CALML4Q96GE6 196 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 TRIM9Q9C026 710 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 TMOD4Q9NZQ9 345 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 CCL15-CCL14A0A0B4J2E2 113 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 POTEMA6NI47 508 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 PDE2AO00408 941 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms