RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SEPT8Q92599 483 aa16.1■□□□□ 0.17
LTBR-209ENST00000541102 TNPO1Q92973 898 aaKnown RBP16.1■□□□□ 0.17
LTBR-209ENST00000541102 C8orf76Q96K31 380 aa16.1■□□□□ 0.17
LTBR-209ENST00000541102 FAM49AQ9H0Q0 323 aaPredicted RBP16.1■□□□□ 0.17
LTBR-209ENST00000541102 ZNF302Q9NR11 478 aa16.1■□□□□ 0.17
LTBR-209ENST00000541102 POTEB3A0JP26 581 aa16.09■□□□□ 0.17
LTBR-209ENST00000541102 BTBD18B2RXH4 712 aa16.09■□□□□ 0.17
LTBR-209ENST00000541102 TLL1O43897 1013 aa16.09■□□□□ 0.17
LTBR-209ENST00000541102 PLEKHG4Q58EX7 1191 aa16.09■□□□□ 0.17
LTBR-209ENST00000541102 FAM26DQ5JW98 314 aa16.09■□□□□ 0.17
LTBR-209ENST00000541102 PDXDC2PQ6P474 469 aa16.09■□□□□ 0.17
LTBR-209ENST00000541102 POTEBQ6S5H4 581 aa16.09■□□□□ 0.17
LTBR-209ENST00000541102 TRMT1LQ7Z2T5 733 aaKnown RBP16.09■□□□□ 0.17
LTBR-209ENST00000541102 CCDC60Q8IWA6 550 aaPredicted RBP16.09■□□□□ 0.17
LTBR-209ENST00000541102 FAM184AQ8NB25 1140 aa16.09■□□□□ 0.17
LTBR-209ENST00000541102 FBXO18Q8NFZ0 1043 aa16.09■□□□□ 0.17
LTBR-209ENST00000541102 LENG9Q96B70 501 aa16.09■□□□□ 0.17
LTBR-209ENST00000541102 GAS2L1Q99501 681 aaPredicted RBP16.09■□□□□ 0.17
LTBR-209ENST00000541102 CERS4Q9HA82 394 aa16.09■□□□□ 0.17
LTBR-209ENST00000541102 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.09■□□□□ 0.17
LTBR-209ENST00000541102 GBF1Q92538 1859 aa16.09■□□□□ 0.17
LTBR-209ENST00000541102 IGKV6D-21A0A0A0MT36 114 aa16.08■□□□□ 0.16
LTBR-209ENST00000541102 MBLAC1A4D2B0 266 aaPredicted RBP16.08■□□□□ 0.16
LTBR-209ENST00000541102 MSH4O15457 936 aa16.08■□□□□ 0.16
LTBR-209ENST00000541102 EFCAB14O75071 495 aa16.08■□□□□ 0.16
LTBR-209ENST00000541102 CHRNA1P02708 482 aa16.08■□□□□ 0.16
LTBR-209ENST00000541102 IGFBP4P22692 258 aa16.08■□□□□ 0.16
LTBR-209ENST00000541102 GALNT17Q6IS24 598 aa16.08■□□□□ 0.16
LTBR-209ENST00000541102 ZNF746Q6NUN9 644 aaPredicted RBP16.08■□□□□ 0.16
LTBR-209ENST00000541102 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.08■□□□□ 0.16
LTBR-209ENST00000541102 CKAP2LQ8IYA6 745 aa16.08■□□□□ 0.16
LTBR-209ENST00000541102 DIS3L2Q8IYB7 885 aaKnown RBP16.08■□□□□ 0.16
LTBR-209ENST00000541102 GJA10Q969M2 543 aa16.08■□□□□ 0.16
LTBR-209ENST00000541102 SAMM50Q9Y512 469 aa16.08■□□□□ 0.16
LTBR-209ENST00000541102 WNT7AO00755 349 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 TDP2O95551 362 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 AMHP03971 560 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 PSAPP07602 524 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 GHRP10912 638 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 XBP1P17861 261 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 KRT2P35908 639 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 SLC26A2P50443 739 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 KRT76Q01546 638 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 TMEM62Q0P6H9 643 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 NONOQ15233 471 aaKnown RBP eCLIP16.07■□□□□ 0.16
LTBR-209ENST00000541102 INF2Q27J81 1249 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 KRT25Q7Z3Z0 450 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 FAM177A1Q8N128 213 aaPredicted RBP16.07■□□□□ 0.16
LTBR-209ENST00000541102 ATP8B4Q8TF62 1192 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 PPM1EQ8WY54 764 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 INTS4Q96HW7 963 aaKnown RBP16.07■□□□□ 0.16
LTBR-209ENST00000541102 GABBR1Q9UBS5 961 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 PCDHA10Q9Y5I2 948 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 CDY2AQ9Y6F7 541 aa16.07■□□□□ 0.16
LTBR-209ENST00000541102 CCDC194A0A1B0GVG4 234 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 RFXAPO00287 272 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 CHMP2AO43633 222 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 HBP1O60381 514 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 GAS7O60861 476 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 ARHGEF15O94989 841 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 MRPS6P82932 125 aaKnown RBP16.06■□□□□ 0.16
LTBR-209ENST00000541102 TRIM29Q14134 588 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 ADGRE1Q14246 886 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 MTHFD1LQ6UB35 978 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 PIK3AP1Q6ZUJ8 805 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 RPAINQ86UA6 219 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 SMAP1Q8IYB5 467 aaPredicted RBP16.06■□□□□ 0.16
LTBR-209ENST00000541102 MYOCDQ8IZQ8 938 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 SLC5A5Q92911 643 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 TEKT3Q9BXF9 490 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 PCDHA2Q9Y5H9 948 aa16.06■□□□□ 0.16
LTBR-209ENST00000541102 LCHNA4D1U4 455 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 GJB5O95377 273 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 ATP4AP20648 1035 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 KLRC1P26715 233 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 TAP1Q03518 808 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 MGAT3Q09327 533 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 LPIN1Q14693 890 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 LETM2Q2VYF4 491 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 Q4G0T1 1027 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 ZNF484Q5JVG2 852 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 LRCH2Q5VUJ6 765 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 IER5Q5VY09 327 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 ARNTL2Q8WYA1 636 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 RIT2Q99578 217 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 RAD9AQ99638 391 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 IFIH1Q9BYX4 1025 aaKnown RBP16.05■□□□□ 0.16
LTBR-209ENST00000541102 DISC1Q9NRI5 854 aa16.05■□□□□ 0.16
LTBR-209ENST00000541102 MAFBQ9Y5Q3 323 aaPredicted RBP16.05■□□□□ 0.16
LTBR-209ENST00000541102 CYP3A7-CYP3A51PA0A087WV96 503 aa16.04■□□□□ 0.16
LTBR-209ENST00000541102 WDR64B1ANS9 1081 aa16.04■□□□□ 0.16
LTBR-209ENST00000541102 UPP2O95045 317 aa16.04■□□□□ 0.16
LTBR-209ENST00000541102 CYP3A7P24462 503 aa16.04■□□□□ 0.16
LTBR-209ENST00000541102 CCDC85BQ15834 202 aaPredicted RBP16.04■□□□□ 0.16
LTBR-209ENST00000541102 LARP1BQ659C4 914 aaKnown RBP16.04■□□□□ 0.16
LTBR-209ENST00000541102 SPRED2Q7Z698 418 aa16.04■□□□□ 0.16
LTBR-209ENST00000541102 UNC45AQ9H3U1 944 aa16.04■□□□□ 0.16
LTBR-209ENST00000541102 DDX25Q9UHL0 483 aaKnown RBP16.04■□□□□ 0.16
LTBR-209ENST00000541102 SMIM35A0A1B0GVV1 85 aa16.03■□□□□ 0.16
LTBR-209ENST00000541102 M0QZ92 97 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms