RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, human

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM65-203	ENST00000540812	CLK2	P49760	499 aa	Known RBP	18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	CRIPAK	Q8N1N5	446 aa		18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	CLDND1	Q9NY35	253 aa		18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	BARHL2	Q9NY43	387 aa		18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	MRPL42	Q9Y6G3	142 aa	Known RBP	18.53	■□□□□ 0.56
TRIM65-203	ENST00000540812	KLF18	A0A0U1RQI7	1052 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	POTEB3	A0JP26	581 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	DDX39A	O00148	427 aa	Known RBP	18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	ADAMTS3	O15072	1205 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	ATG7	O95352	703 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	RPLP2	P05387	115 aa	Known RBP	18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	LTBR	P36941	435 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	PUS10	Q3MIT2	529 aa	Known RBP	18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	TSGA10IP	Q3SY00	556 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	POTEB	Q6S5H4	581 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	FAM122A	Q96E09	287 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	UIMC1	Q96RL1	719 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	LMAN2L	Q9H0V9	348 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	PADI3	Q9ULW8	664 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	RWDD3	Q9Y3V2	267 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	SQOR	Q9Y6N5	450 aa		18.52	■□□□□ 0.56
TRIM65-203	ENST00000540812	IGSF9B	Q9UPX0	1349 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	IGKV6D-21	A0A0A0MT36	114 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	FAM86B1	E9PN63	330 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	FAM86B2	P0C5J1	330 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.51	■□□□□ 0.55	2e-12	■■■■□ 19.5
TRIM65-203	ENST00000540812	ZNF76	P36508	570 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	GATM	P50440	423 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	DLX2	Q07687	328 aa	Predicted RBP	18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	HYAL1	Q12794	435 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	AP3B2	Q13367	1082 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	TMEM266	Q2M3C6	531 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	JAKMIP3	Q5VZ66	844 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	MTHFD1L	Q6UB35	978 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	TEX2	Q8IWB9	1127 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	CELF4	Q9BZC1	486 aa	Known RBP	18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	TMX1	Q9H3N1	280 aa		18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	ALG13	Q9NP73	1137 aa	Known RBP	18.51	■□□□□ 0.55
TRIM65-203	ENST00000540812	SMIM35	A0A1B0GVV1	85 aa		18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	hCG_1984214	I3L0E3	225 aa		18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812		M0QZ92	97 aa		18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	CPA1	P15085	419 aa		18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	ADD1	P35611	737 aa	Known RBP	18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	PAK2	Q13177	524 aa		18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	CAMK1	Q14012	370 aa		18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	CLUL1	Q15846	466 aa		18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	CTC1	Q2NKJ3	1217 aa		18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	PAN2	Q504Q3	1202 aa	Known RBP	18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	ABHD15	Q6UXT9	468 aa		18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	NPAS4	Q8IUM7	802 aa		18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	ZNF713	Q8N859	430 aa	Predicted RBP	18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	TNPO1	Q92973	898 aa	Known RBP	18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	FTHL17	Q9BXU8	183 aa		18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.5	■□□□□ 0.55
TRIM65-203	ENST00000540812	KDM3A	Q9Y4C1	1321 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	BACH1	O14867	736 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	DHX15	O43143	795 aa	Known RBP	18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	MMP1	P03956	469 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	IBSP	P21815	317 aa	Predicted RBP	18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	KRT76	Q01546	638 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	ZP2	Q05996	745 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	NIPA1	Q7RTP0	329 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	PLA2G4D	Q86XP0	818 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	CCDC60	Q8IWA6	550 aa	Predicted RBP	18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	CMTR2	Q8IYT2	770 aa	Known RBP	18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	PLVAP	Q9BX97	442 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	GLT8D2	Q9H1C3	349 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	CDHR5	Q9HBB8	845 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	PLAGL2	Q9UPG8	496 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	HCN4	Q9Y3Q4	1203 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	LOXHD1	Q8IVV2	1947 aa		18.49	■□□□□ 0.55
TRIM65-203	ENST00000540812	IGLV3-22	A0A075B6J6	115 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	ZBTB42	B2RXF5	422 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	LINC01565	O15544	149 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	NCK2	O43639	380 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	HBP1	O60381	514 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	MGEA5	O60502	916 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	CDC45	O75419	566 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	SCG2	P13521	617 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	ATP4A	P20648	1035 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	DNAJB1	P25685	340 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	KLRC1	P26715	233 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	SLC26A2	P50443	739 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	APOBR	Q0VD83	1088 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	KRT32	Q14532	448 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	PFKFB3	Q16875	520 aa	Predicted RBP	18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	KIAA0319L	Q8IZA0	1049 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	NME8	Q8N427	588 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	ATP8B4	Q8TF62	1192 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	CRYGN	Q8WXF5	182 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	IGFLR1	Q9H665	355 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	GINS2	Q9Y248	185 aa		18.48	■□□□□ 0.55
TRIM65-203	ENST00000540812	TBX10	O75333	385 aa		18.47	■□□□□ 0.55
TRIM65-203	ENST00000540812	ITGB1	P05556	798 aa		18.47	■□□□□ 0.55
TRIM65-203	ENST00000540812	CYP3A4	P08684	503 aa		18.47	■□□□□ 0.55
TRIM65-203	ENST00000540812	METAP2	P50579	478 aa	Known RBP eCLIP	18.47	■□□□□ 0.55
TRIM65-203	ENST00000540812	RCAN1	P53805	252 aa		18.47	■□□□□ 0.55
TRIM65-203	ENST00000540812	NFX1	Q12986	1120 aa	Known RBP	18.47	■□□□□ 0.55
TRIM65-203	ENST00000540812	FAM160B1	Q5W0V3	765 aa		18.47	■□□□□ 0.55
TRIM65-203	ENST00000540812	PDXDC2P	Q6P474	469 aa		18.47	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms