RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PRKCIP41743 596 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 CEP85LQ5SZL2 805 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 MBOAT7Q96N66 472 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 ZHX3Q9H4I2 956 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 ATP8B3O60423 1300 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 MEFVO15553 781 aaPredicted RBP13.44□□□□□ -0.26
NPC1-202ENST00000540608 CEP104O60308 925 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 ZBTB48P10074 688 aaPredicted RBP13.44□□□□□ -0.26
NPC1-202ENST00000540608 HOXA10P31260 410 aaPredicted RBP13.44□□□□□ -0.26
NPC1-202ENST00000540608 KNOP1Q1ED39 458 aaKnown RBP13.44□□□□□ -0.26
NPC1-202ENST00000540608 NAA35Q5VZE5 725 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 ALKBH5Q6P6C2 394 aaKnown RBP13.44□□□□□ -0.26
NPC1-202ENST00000540608 MICALCLQ6ZW33 695 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 MAATS1Q7Z4T9 603 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 SLFN12Q8IYM2 578 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 CERS5Q8N5B7 392 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 MXD3Q9BW11 206 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 C10orf71Q711Q0 1435 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 MYO3BQ8WXR4 1341 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 ARFGEF1Q9Y6D6 1849 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 GOLGA6L10A6NI86 522 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 SLURP2P0DP57 97 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 HSD17B3P37058 310 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 CASP5P51878 434 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 GIT2Q14161 759 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 HLTFQ14527 1009 aaKnown RBP eCLIP13.44□□□□□ -0.263e-6■■□□□ 14.1
NPC1-202ENST00000540608 EXOC3L4Q17RC7 722 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 EPM2AIP1Q7L775 607 aaPredicted RBP13.44□□□□□ -0.26
NPC1-202ENST00000540608 YTHDF3Q7Z739 585 aaKnown RBP13.44□□□□□ -0.26
NPC1-202ENST00000540608 OTUD6BQ8N6M0 293 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 TPCN2Q8NHX9 752 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 ZNF473Q8WTR7 871 aaKnown RBP13.44□□□□□ -0.26
NPC1-202ENST00000540608 LMBR1Q8WVP7 490 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 LRRC45Q96CN5 670 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 UIMC1Q96RL1 719 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.44□□□□□ -0.264e-8■■■■■ 28.7
NPC1-202ENST00000540608 SERPINB13Q9UIV8 391 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 NENFQ9UMX5 172 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 LTBP1Q14766 1721 aa13.44□□□□□ -0.26
NPC1-202ENST00000540608 USP17L15C9J2P7 530 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 USP17L13C9JLJ4 530 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 USP17L11C9JVI0 530 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 USP17L18D6R9N7 530 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 USP17L22D6RA61 530 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 USP17L17D6RBQ6 530 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 USP17L19D6RCP7 530 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 USP17L20D6RJB6 530 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 H0YGN5 161 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 FLOT1O75955 427 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 KIAA0754O94854 1291 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 HOXD13P35453 343 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 STAT3P40763 770 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 USP17L24Q0WX57 530 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 USP17L6PQ6QN14 398 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 KCTD1Q719H9 257 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 SLFN11Q7Z7L1 901 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 ARFGAP2Q8N6H7 521 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 CCT8L2Q96SF2 557 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 GGA2Q9UJY4 613 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 FBXL5Q9UKA1 691 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 NFS1Q9Y697 457 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 CCDC188H7C350 402 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 GCOM1H8Y6P7 765 aaPredicted RBP13.43□□□□□ -0.26
NPC1-202ENST00000540608 PGRMC1O00264 195 aaKnown RBP13.43□□□□□ -0.26
NPC1-202ENST00000540608 PDXKO00764 312 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 CALUO43852 315 aaPredicted RBP13.43□□□□□ -0.26
NPC1-202ENST00000540608 MYZAPP0CAP1 466 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 XRCC5P13010 732 aaKnown RBP13.43□□□□□ -0.26
NPC1-202ENST00000540608 GUCY2CP25092 1073 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 MOXD1Q6UVY6 613 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 NLRP14Q86W24 1093 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 CATSPER3Q86XQ3 398 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 METTL13Q8N6R0 699 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 RBM46Q8TBY0 533 aaKnown RBP13.43□□□□□ -0.26
NPC1-202ENST00000540608 CRAMP1Q96RY5 1269 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 STXBP5LQ9Y2K9 1186 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 MYH4Q9Y623 1939 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 A0A0A6YYK5 440 aaPredicted RBP13.43□□□□□ -0.26
NPC1-202ENST00000540608 POTEFA5A3E0 1075 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 SART1O43290 800 aaKnown RBP13.43□□□□□ -0.26
NPC1-202ENST00000540608 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 SHMT1P34896 483 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 EPHA7Q15375 998 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 POTEGQ6S5H5 508 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 POTEEQ6S8J3 1075 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 RASGEF1CQ8N431 466 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 SYT2Q8N9I0 419 aaPredicted RBP13.43□□□□□ -0.26
NPC1-202ENST00000540608 ANO3Q9BYT9 981 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 GOLPH3Q9H4A6 298 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 QTRT2Q9H974 415 aaKnown RBP13.43□□□□□ -0.26
NPC1-202ENST00000540608 POLD4Q9HCU8 107 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 INTUQ9ULD6 942 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 DNM3Q9UQ16 869 aa13.43□□□□□ -0.26
NPC1-202ENST00000540608 POLRMTO00411 1230 aaKnown RBP13.42□□□□□ -0.26
NPC1-202ENST00000540608 FSBPO95073 299 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 HNRNPH1P31943 449 aaKnown RBP13.42□□□□□ -0.26
NPC1-202ENST00000540608 FNTAP49354 379 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 SCNN1DP51172 638 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 JAM2P57087 298 aa13.42□□□□□ -0.26
NPC1-202ENST00000540608 UAP1Q16222 522 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms