RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 PLS1Q14651 629 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 PTGISQ16647 500 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 QRICH1Q2TAL8 776 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 KDM7AQ6ZMT4 941 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 NLRP14Q86W24 1093 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 UHMK1Q8TAS1 419 aaKnown RBP17.4■□□□□ 0.38
CACFD1-206ENST00000540581 CEP63Q96MT8 703 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 NT5C3AQ9H0P0 336 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 EPN3Q9H201 632 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 DHX36Q9H2U1 1008 aaKnown RBP17.4■□□□□ 0.38
CACFD1-206ENST00000540581 GOPCQ9HD26 462 aa17.4■□□□□ 0.38
CACFD1-206ENST00000540581 CHORDC1Q9UHD1 332 aaPredicted RBP17.4■□□□□ 0.38
CACFD1-206ENST00000540581 NOVA2Q9UNW9 492 aaKnown RBP17.4■□□□□ 0.38
CACFD1-206ENST00000540581 GCOM1H8Y6P7 765 aaPredicted RBP17.39■□□□□ 0.37
CACFD1-206ENST00000540581 MYZAPP0CAP1 466 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 ZNF211Q13398 564 aaPredicted RBP17.39■□□□□ 0.37
CACFD1-206ENST00000540581 LLGL1Q15334 1064 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 UAP1Q16222 522 aaPredicted RBP17.39■□□□□ 0.37
CACFD1-206ENST00000540581 CHADLQ6NUI6 762 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 KCNV1Q6PIU1 500 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 TRMT1LQ7Z2T5 733 aaKnown RBP17.39■□□□□ 0.37
CACFD1-206ENST00000540581 RDH13Q8NBN7 331 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 CYP2W1Q8TAV3 490 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 PIGOQ8TEQ8 1089 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 EDEM3Q9BZQ6 932 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 SERPINB13Q9UIV8 391 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 NR2E1Q9Y466 385 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 AFPP02771 609 aaKnown RBP17.39■□□□□ 0.37
CACFD1-206ENST00000540581 ZFPM1Q8IX07 1006 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 MYCBPAPQ8TBZ2 947 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 ANO3Q9BYT9 981 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 BHMT2Q9H2M3 363 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 RGL1Q9NZL6 768 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 AIPL1Q9NZN9 384 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 GCNT4Q9P109 453 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 RNF14Q9UBS8 474 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 PCDHAC2Q9Y5I4 1007 aa17.39■□□□□ 0.37
CACFD1-206ENST00000540581 DDX60LQ5H9U9 1706 aaKnown RBP17.39■□□□□ 0.37
CACFD1-206ENST00000540581 TNFRSF8P28908 595 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 MKRN4PQ13434 485 aaPredicted RBP17.38■□□□□ 0.37
CACFD1-206ENST00000540581 PRR5LQ6MZQ0 368 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 B4GALNT4Q76KP1 1039 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 WHAMMQ8TF30 809 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 P2RX7Q99572 595 aaKnown RBP17.38■□□□□ 0.37
CACFD1-206ENST00000540581 RREB1Q92766 1687 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 ZBTB39O15060 712 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 POLD1P28340 1107 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 NFIAQ12857 509 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 ITGB3BPQ13352 177 aaPredicted RBP17.38■□□□□ 0.37
CACFD1-206ENST00000540581 NAV1Q8NEY1 1877 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 MEFVO15553 781 aaPredicted RBP17.38■□□□□ 0.37
CACFD1-206ENST00000540581 GNA14O95837 355 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 HOXD13P35453 343 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 ZC2HC1CQ53FD0 456 aaPredicted RBP17.38■□□□□ 0.37
CACFD1-206ENST00000540581 GLYCTKQ8IVS8 523 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 SYN2Q92777 582 aaPredicted RBP17.38■□□□□ 0.37
CACFD1-206ENST00000540581 ATP8A1Q9Y2Q0 1164 aa17.38■□□□□ 0.37
CACFD1-206ENST00000540581 COL16A1Q07092 1604 aaPredicted RBP17.37■□□□□ 0.37
CACFD1-206ENST00000540581 KDM3AQ9Y4C1 1321 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 TLDC2A0PJX2 215 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 PGRMC1O00264 195 aaKnown RBP17.37■□□□□ 0.37
CACFD1-206ENST00000540581 ECHS1P30084 290 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 USP11P51784 963 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 UBXN2AP68543 259 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 GIT2Q14161 759 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 TPCN2Q8NHX9 752 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 TBC1D16Q8TBP0 767 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 MDM1Q8TC05 714 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 RUBCNQ92622 972 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 CLK2P49760 499 aaKnown RBP17.37■□□□□ 0.37
CACFD1-206ENST00000540581 SLC12A3P55017 1021 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 ZNF844Q08AG5 666 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 SF3B2Q13435 895 aaKnown RBP17.37■□□□□ 0.37
CACFD1-206ENST00000540581 ARHGAP44Q17R89 818 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 KNOP1Q1ED39 458 aaKnown RBP17.37■□□□□ 0.37
CACFD1-206ENST00000540581 NGLY1Q96IV0 654 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 ISCUQ9H1K1 167 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 TMBIM4Q9HC24 238 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 DNM3Q9UQ16 869 aa17.37■□□□□ 0.37
CACFD1-206ENST00000540581 TMEM110-MUSTN1A8MSY1 372 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 FGGP02679 453 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 H2AFZP0C0S5 128 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 SMARCA1P28370 1054 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 DHX9Q08211 1270 aaKnown RBP17.36■□□□□ 0.37
CACFD1-206ENST00000540581 ORC2Q13416 577 aaPredicted RBP17.36■□□□□ 0.37
CACFD1-206ENST00000540581 CTTNQ14247 550 aaKnown RBP17.36■□□□□ 0.37
CACFD1-206ENST00000540581 COG2Q14746 738 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 QPCTQ16769 361 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 KRT71Q3SY84 523 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 AADACL2Q6P093 401 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 H2AFVQ71UI9 128 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 RUSC1Q9BVN2 902 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 CNOT8Q9UFF9 292 aaKnown RBP17.36■□□□□ 0.37
CACFD1-206ENST00000540581 CPP00450 1065 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 NR3C1P04150 777 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 NMT1P30419 496 aaKnown RBP17.36■□□□□ 0.37
CACFD1-206ENST00000540581 IFFO1Q0D2I5 559 aa17.36■□□□□ 0.37
CACFD1-206ENST00000540581 DDX3XO00571 662 aaKnown RBP eCLIP17.35■□□□□ 0.375e-8■■■□□ 18.6
CACFD1-206ENST00000540581 LRRN2O75325 713 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms