RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 TBC1D22BQ9NU19 505 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 LRFN2Q9ULH4 789 aa17.39■□□□□ 0.37
UBE3B-211ENST00000539843 ENPP3O14638 875 aa17.38■□□□□ 0.37
UBE3B-211ENST00000539843 COL9A1P20849 921 aa17.38■□□□□ 0.37
UBE3B-211ENST00000539843 CD52P31358 61 aa17.38■□□□□ 0.37
UBE3B-211ENST00000539843 CLK2P49760 499 aaKnown RBP17.38■□□□□ 0.37
UBE3B-211ENST00000539843 KRT76Q01546 638 aa17.38■□□□□ 0.37
UBE3B-211ENST00000539843 APOBRQ0VD83 1088 aa17.38■□□□□ 0.37
UBE3B-211ENST00000539843 LEXMQ3ZCV2 418 aa17.38■□□□□ 0.37
UBE3B-211ENST00000539843 PDXDC2PQ6P474 469 aa17.38■□□□□ 0.37
UBE3B-211ENST00000539843 EP400NLQ6ZTU2 488 aa17.38■□□□□ 0.37
UBE3B-211ENST00000539843 PCYT2Q99447 389 aa17.38■□□□□ 0.37
UBE3B-211ENST00000539843 ZNF577Q9BSK1 485 aa17.38■□□□□ 0.37
UBE3B-211ENST00000539843 TMEM260Q9NX78 707 aa17.38■□□□□ 0.37
UBE3B-211ENST00000539843 SPTBN5Q9NRC6 3674 aaKnown RBP17.38■□□□□ 0.37
UBE3B-211ENST00000539843 COL1A2P08123 1366 aa17.38■□□□□ 0.37
UBE3B-211ENST00000539843 IPO5O00410 1097 aaKnown RBP17.37■□□□□ 0.37
UBE3B-211ENST00000539843 ATG7O95352 703 aa17.37■□□□□ 0.37
UBE3B-211ENST00000539843 CYP3A4P08684 503 aa17.37■□□□□ 0.37
UBE3B-211ENST00000539843 HSPA4P34932 840 aa17.37■□□□□ 0.37
UBE3B-211ENST00000539843 ADD1P35611 737 aaKnown RBP17.37■□□□□ 0.37
UBE3B-211ENST00000539843 TMEM62Q0P6H9 643 aa17.37■□□□□ 0.37
UBE3B-211ENST00000539843 ITGB3BPQ13352 177 aaPredicted RBP17.37■□□□□ 0.37
UBE3B-211ENST00000539843 MTHFD1LQ6UB35 978 aa17.37■□□□□ 0.37
UBE3B-211ENST00000539843 NPAS4Q8IUM7 802 aa17.37■□□□□ 0.37
UBE3B-211ENST00000539843 SMAP1Q8IYB5 467 aaPredicted RBP17.37■□□□□ 0.37
UBE3B-211ENST00000539843 ATP8B4Q8TF62 1192 aa17.37■□□□□ 0.37
UBE3B-211ENST00000539843 PLVAPQ9BX97 442 aa17.37■□□□□ 0.37
UBE3B-211ENST00000539843 CELF4Q9BZC1 486 aaKnown RBP17.37■□□□□ 0.37
UBE3B-211ENST00000539843 ZMYND12Q9H0C1 365 aa17.37■□□□□ 0.37
UBE3B-211ENST00000539843 CEP131Q9UPN4 1083 aa17.37■□□□□ 0.37
UBE3B-211ENST00000539843 GINS2Q9Y248 185 aa17.37■□□□□ 0.37
UBE3B-211ENST00000539843 CHD7Q9P2D1 2997 aa17.37■□□□□ 0.37
UBE3B-211ENST00000539843 NCOR1O75376 2440 aa17.36■□□□□ 0.37
UBE3B-211ENST00000539843 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.36■□□□□ 0.37
UBE3B-211ENST00000539843 C5orf67F2Z3F1 127 aa17.36■□□□□ 0.37
UBE3B-211ENST00000539843 PRPF3O43395 683 aaKnown RBP17.36■□□□□ 0.37
UBE3B-211ENST00000539843 PSAPP07602 524 aa17.36■□□□□ 0.37
UBE3B-211ENST00000539843 BMPR1AP36894 532 aa17.36■□□□□ 0.37
UBE3B-211ENST00000539843 ZNF484Q5JVG2 852 aa17.36■□□□□ 0.37
UBE3B-211ENST00000539843 ZNF746Q6NUN9 644 aaPredicted RBP17.36■□□□□ 0.37
UBE3B-211ENST00000539843 SKAP1Q86WV1 359 aa17.36■□□□□ 0.37
UBE3B-211ENST00000539843 TRIM22Q8IYM9 498 aa17.36■□□□□ 0.37
UBE3B-211ENST00000539843 RNF26Q9BY78 433 aaPredicted RBP17.36■□□□□ 0.37
UBE3B-211ENST00000539843 OSBPL7Q9BZF2 842 aa17.36■□□□□ 0.37
UBE3B-211ENST00000539843 FAM217BQ9NTX9 383 aaPredicted RBP17.36■□□□□ 0.37
UBE3B-211ENST00000539843 SAMM50Q9Y512 469 aa17.36■□□□□ 0.37
UBE3B-211ENST00000539843 IGSF9BQ9UPX0 1349 aa17.36■□□□□ 0.37
UBE3B-211ENST00000539843 KDM3AQ9Y4C1 1321 aa17.36■□□□□ 0.37
UBE3B-211ENST00000539843 FAM86B1E9PN63 330 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 FAM86B2P0C5J1 330 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 RPS6KB1P23443 525 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 KLRC1P26715 233 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 SSTR3P32745 418 aaPredicted RBP17.35■□□□□ 0.37
UBE3B-211ENST00000539843 NFX1Q12986 1120 aaKnown RBP17.35■□□□□ 0.37
UBE3B-211ENST00000539843 PTCRAQ6ISU1 281 aaPredicted RBP17.35■□□□□ 0.37
UBE3B-211ENST00000539843 CPLX2Q6PUV4 134 aaKnown RBP17.35■□□□□ 0.37
UBE3B-211ENST00000539843 ABHD15Q6UXT9 468 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 CMTR2Q8IYT2 770 aaKnown RBP17.35■□□□□ 0.37
UBE3B-211ENST00000539843 FBXL16Q8N461 479 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 TRAPPC12Q8WVT3 735 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 BBXQ8WY36 941 aaPredicted RBP17.35■□□□□ 0.37
UBE3B-211ENST00000539843 KCNB2Q92953 911 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 PABPC5Q96DU9 382 aaKnown RBP17.35■□□□□ 0.37
UBE3B-211ENST00000539843 FAM167AQ96KS9 214 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 C22orf23Q9BZE7 217 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 PADI3Q9ULW8 664 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 SNX14Q9Y5W7 946 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 NID2Q14112 1375 aa17.35■□□□□ 0.37
UBE3B-211ENST00000539843 IGKV6D-21A0A0A0MT36 114 aa17.34■□□□□ 0.37
UBE3B-211ENST00000539843 DENND3A2RUS2 1198 aa17.34■□□□□ 0.37
UBE3B-211ENST00000539843 CPLX1O14810 134 aa17.34■□□□□ 0.37
UBE3B-211ENST00000539843 GPR182O15218 404 aa17.34■□□□□ 0.37
UBE3B-211ENST00000539843 RPS6KA5O75582 802 aa17.34■□□□□ 0.37
UBE3B-211ENST00000539843 DGKIO75912 1065 aa17.34■□□□□ 0.37
UBE3B-211ENST00000539843 PRR16Q569H4 304 aa17.34■□□□□ 0.37
UBE3B-211ENST00000539843 NAALADL2Q58DX5 795 aa17.34■□□□□ 0.37
UBE3B-211ENST00000539843 TCEAL5Q5H9L2 206 aa17.34■□□□□ 0.37
UBE3B-211ENST00000539843 SWSAP1Q6NVH7 229 aa17.34■□□□□ 0.37
UBE3B-211ENST00000539843 CCDC60Q8IWA6 550 aaPredicted RBP17.34■□□□□ 0.37
UBE3B-211ENST00000539843 CLP1Q92989 425 aaKnown RBP17.34■□□□□ 0.37
UBE3B-211ENST00000539843 SLC26A6Q9BXS9 759 aa17.34■□□□□ 0.37
UBE3B-211ENST00000539843 AGO3Q9H9G7 860 aaKnown RBP17.34■□□□□ 0.37
UBE3B-211ENST00000539843 PCDHA10Q9Y5I2 948 aa17.34■□□□□ 0.37
UBE3B-211ENST00000539843 EPB41L2O43491 1005 aaKnown RBP17.33■□□□□ 0.36
UBE3B-211ENST00000539843 CCNE2O96020 404 aa17.33■□□□□ 0.36
UBE3B-211ENST00000539843 CPA1P15085 419 aa17.33■□□□□ 0.36
UBE3B-211ENST00000539843 TMOD1P28289 359 aa17.33■□□□□ 0.36
UBE3B-211ENST00000539843 ZNF710Q8N1W2 664 aa17.33■□□□□ 0.36
UBE3B-211ENST00000539843 METTL13Q8N6R0 699 aa17.33■□□□□ 0.36
UBE3B-211ENST00000539843 PHKBQ93100 1093 aa17.33■□□□□ 0.36
UBE3B-211ENST00000539843 ZNF689Q96CS4 500 aaPredicted RBP17.33■□□□□ 0.36
UBE3B-211ENST00000539843 ZBTB10Q96DT7 871 aa17.33■□□□□ 0.36
UBE3B-211ENST00000539843 MAP7D2Q96T17 732 aa17.33■□□□□ 0.36
UBE3B-211ENST00000539843 AAASQ9NRG9 546 aa17.33■□□□□ 0.36
UBE3B-211ENST00000539843 C1orf112Q9NSG2 853 aa17.33■□□□□ 0.36
UBE3B-211ENST00000539843 CLDND1Q9NY35 253 aa17.33■□□□□ 0.36
UBE3B-211ENST00000539843 PCDHB7Q9Y5E2 793 aa17.33■□□□□ 0.36
UBE3B-211ENST00000539843 TCF20Q9UGU0 1960 aaKnown RBP17.33■□□□□ 0.36
UBE3B-211ENST00000539843 IGLV3-22A0A075B6J6 115 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms