RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 NRBP2Q9NSY0 501 aa17.26■□□□□ 0.35
DDB1-216ENST00000539739 POTEB3A0JP26 581 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 PRPF40AO75400 957 aaKnown RBP17.25■□□□□ 0.35
DDB1-216ENST00000539739 F2P00734 622 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 MARK3P27448 753 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 UGCGQ16739 394 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 HYIQ5T013 277 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 POTEBQ6S5H4 581 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 USP49Q70CQ1 688 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 MRPS27Q92552 414 aaKnown RBP17.25■□□□□ 0.35
DDB1-216ENST00000539739 NACC1Q96RE7 527 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 KIAA1024Q9UPX6 916 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 A0A0U1RQG5 324 aaPredicted RBP17.25■□□□□ 0.35
DDB1-216ENST00000539739 ZNF862O60290 1169 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 LYPLA2O95372 231 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 PSEN2P49810 448 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 CHMP4BP1P59074 171 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 PRKCEQ02156 737 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 MFSD10Q14728 455 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 KARSQ15046 597 aaKnown RBP17.25■□□□□ 0.35
DDB1-216ENST00000539739 KIAA0753Q2KHM9 967 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 XKR3Q5GH77 459 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 CCDC73Q6ZRK6 1079 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 OTUD6AQ7L8S5 288 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 TRMT1LQ7Z2T5 733 aaKnown RBP17.25■□□□□ 0.35
DDB1-216ENST00000539739 FSIP1Q8NA03 581 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 BBXQ8WY36 941 aaPredicted RBP17.25■□□□□ 0.35
DDB1-216ENST00000539739 KAT2BQ92831 832 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 PYM1Q9BRP8 204 aaKnown RBP17.25■□□□□ 0.35
DDB1-216ENST00000539739 DDX19AQ9NUU7 478 aaKnown RBP17.25■□□□□ 0.35
DDB1-216ENST00000539739 PHF24Q9UPV7 400 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 TRPC6Q9Y210 931 aa17.25■□□□□ 0.35
DDB1-216ENST00000539739 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
DDB1-216ENST00000539739 DDX11L8A8MPP1 907 aa17.24■□□□□ 0.35
DDB1-216ENST00000539739 HBP1O60381 514 aa17.24■□□□□ 0.35
DDB1-216ENST00000539739 OATP04181 439 aa17.24■□□□□ 0.35
DDB1-216ENST00000539739 UBE2HP62256 183 aa17.24■□□□□ 0.35
DDB1-216ENST00000539739 PLCB4Q15147 1175 aa17.24■□□□□ 0.35
DDB1-216ENST00000539739 RRAGBQ5VZM2 374 aa17.24■□□□□ 0.35
DDB1-216ENST00000539739 POTEGQ6S5H5 508 aa17.24■□□□□ 0.35
DDB1-216ENST00000539739 ATP8B4Q8TF62 1192 aa17.24■□□□□ 0.35
DDB1-216ENST00000539739 CCDC43Q96MW1 224 aaKnown RBP17.24■□□□□ 0.35
DDB1-216ENST00000539739 PLIN2Q99541 437 aa17.24■□□□□ 0.35
DDB1-216ENST00000539739 PDCL3Q9H2J4 239 aa17.24■□□□□ 0.35
DDB1-216ENST00000539739 WRAP73Q9P2S5 460 aaPredicted RBP17.24■□□□□ 0.35
DDB1-216ENST00000539739 DNM3Q9UQ16 869 aa17.24■□□□□ 0.35
DDB1-216ENST00000539739 FRMPD3Q5JV73 1810 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 A0A1B0GVL5 298 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 HAS3O00219 553 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 XRCC6P12956 609 aaKnown RBP eCLIP17.23■□□□□ 0.35
DDB1-216ENST00000539739 ATP4AP20648 1035 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 YWHABP31946 246 aaKnown RBP17.23■□□□□ 0.35
DDB1-216ENST00000539739 GRB10Q13322 594 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 ECM1Q16610 540 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 TMEM119Q4V9L6 283 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 ABHD8Q96I13 439 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 PNMA5Q96PV4 448 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 PANK2Q9BZ23 570 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 RNPEPQ9H4A4 650 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 STARD7Q9NQZ5 370 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 KCNH3Q9ULD8 1083 aa17.23■□□□□ 0.35
DDB1-216ENST00000539739 A0A1W2PQ45 241 aaPredicted RBP17.22■□□□□ 0.35
DDB1-216ENST00000539739 A0A1W2PQY0 241 aa17.22■□□□□ 0.35
DDB1-216ENST00000539739 PFKFB1P16118 471 aa17.22■□□□□ 0.35
DDB1-216ENST00000539739 PLCG1P19174 1290 aa17.22■□□□□ 0.35
DDB1-216ENST00000539739 PDILTQ8N807 584 aa17.22■□□□□ 0.35
DDB1-216ENST00000539739 ANKEF1Q9NU02 776 aa17.22■□□□□ 0.35
DDB1-216ENST00000539739 SEPT9Q9UHD8 586 aaPredicted RBP17.22■□□□□ 0.35
DDB1-216ENST00000539739 MYH9P35579 1960 aaKnown RBP17.22■□□□□ 0.35
DDB1-216ENST00000539739 POLR2DO15514 142 aaKnown RBP17.21■□□□□ 0.35
DDB1-216ENST00000539739 GADD45BO75293 160 aaPredicted RBP17.21■□□□□ 0.35
DDB1-216ENST00000539739 STAT6P42226 847 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 SYKP43405 635 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 PSMC6P62333 389 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 NBPF20Q3BBV1 942 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 TNS4Q8IZW8 715 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 C7orf31Q8N865 590 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 IQUBQ8NA54 791 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 PIGOQ8TEQ8 1089 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 NIFKQ9BYG3 293 aaKnown RBP17.21■□□□□ 0.35
DDB1-216ENST00000539739 SEZ6LQ9BYH1 1024 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 STK17AQ9UEE5 414 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 FAM237AA0A1B0GTK4 181 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 MCM4P33991 863 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 PPFIA1Q13136 1202 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 ITGA7Q13683 1181 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 XKR9Q5GH70 373 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 ZNF484Q5JVG2 852 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
DDB1-216ENST00000539739 NFRKBQ6P4R8 1299 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 ANO5Q75V66 913 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 CEP170P1Q96L14 293 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 SENP6Q9GZR1 1112 aaPredicted RBP17.21■□□□□ 0.35
DDB1-216ENST00000539739 LMBRD1Q9NUN5 540 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 DBR1Q9UK59 544 aaKnown RBP17.21■□□□□ 0.35
DDB1-216ENST00000539739 HPSEQ9Y251 543 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 PPME1Q9Y570 386 aa17.21■□□□□ 0.35
DDB1-216ENST00000539739 NRCAMQ92823 1304 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 A0A087WWV3 80 aa17.2■□□□□ 0.34
DDB1-216ENST00000539739 RRN3P2A6NIE6 340 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms