RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 IRF2BP1Q8IU81 584 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 TRIM47Q96LD4 638 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 DUSP9Q99956 384 aaKnown RBP18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 LXNQ9BS40 222 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 RUSC1Q9BVN2 902 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 MOV10L1Q9BXT6 1211 aaKnown RBP18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 FGFBP2Q9BYJ0 223 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 SEMA6BQ9H3T3 888 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 TBC1D22BQ9NU19 505 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 RBPJLQ9UBG7 517 aa18.9■□□□□ 0.62
PCDHB17P-201ENST00000539533 ASTN1O14525 1302 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 ADKP55263 362 aaKnown RBP18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 HNRNPH2P55795 449 aaKnown RBP18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 FSTL1Q12841 308 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 PSMD2Q13200 908 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 NR1I3Q14994 352 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 Q3C1V9 767 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 HERC4Q5GLZ8 1057 aaPredicted RBP18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 CCDC65Q8IXS2 484 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 REEP2Q9BRK0 252 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 ZHX3Q9H4I2 956 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 MRFAP1Q9Y605 127 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 LCTP09848 1927 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 A0A1B0GTH6 734 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 FAM26FQ5R3K3 315 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 INPP4AQ96PE3 977 aaPredicted RBP18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 EPC1Q9H2F5 836 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 SAMM50Q9Y512 469 aa18.89■□□□□ 0.61
PCDHB17P-201ENST00000539533 TEX33O43247 280 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 ERCC3P19447 782 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 PPP2R3AQ06190 1150 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 KRT31Q15323 416 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 TCP11X2Q5H9J9 407 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 GPR161Q8N6U8 529 aaKnown RBP18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 BCAS3Q9H6U6 928 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 ADD3Q9UEY8 706 aaKnown RBP18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 FBXO40Q9UH90 709 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 PCDHA2Q9Y5H9 948 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 FRMD3A2A2Y4 597 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 KCNJ18B7U540 433 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 OSBPP22059 807 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 PPP1R2P41236 205 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 KCNJ12Q14500 433 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 CENPPQ6IPU0 288 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 RINT1Q6NUQ1 792 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 GUF1Q8N442 669 aaKnown RBP18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 KCTD17Q8N5Z5 321 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 GPRASP2Q96D09 838 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 NACC1Q96RE7 527 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 GBA2Q9HCG7 927 aaPredicted RBP18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 NMRK2Q9NPI5 230 aa18.88■□□□□ 0.61
PCDHB17P-201ENST00000539533 RSPH10B2B2RC85 870 aa18.87■□□□□ 0.61
PCDHB17P-201ENST00000539533 CCNE2O96020 404 aa18.87■□□□□ 0.61
PCDHB17P-201ENST00000539533 RSPH10BP0C881 870 aa18.87■□□□□ 0.61
PCDHB17P-201ENST00000539533 CC2D1AQ6P1N0 951 aaPredicted RBP18.87■□□□□ 0.61
PCDHB17P-201ENST00000539533 NLRX1Q86UT6 975 aa18.87■□□□□ 0.61
PCDHB17P-201ENST00000539533 CSGALNACT2Q8N6G5 542 aa18.87■□□□□ 0.61
PCDHB17P-201ENST00000539533 UBXN6Q9BZV1 441 aa18.87■□□□□ 0.61
PCDHB17P-201ENST00000539533 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.87■□□□□ 0.61
PCDHB17P-201ENST00000539533 LIMA1Q9UHB6 759 aaKnown RBP18.87■□□□□ 0.61
PCDHB17P-201ENST00000539533 BICDL2A1A5D9 508 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 LRRC10BA6NIK2 292 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 CELF2O95319 508 aaKnown RBP18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 TBC1D8O95759 1140 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 P4HBP07237 508 aaKnown RBP18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 CYP2C8P10632 490 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 MUTP22033 750 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 TEX35Q5T0J7 233 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 RSRC2Q7L4I2 434 aaKnown RBP18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 ZNF526Q8TF50 670 aaPredicted RBP18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 MAF1Q9H063 256 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 PFASO15067 1338 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 POLR3GO15318 223 aaPredicted RBP18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 SASH3O75995 380 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 CTAGE1Q96RT6 745 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 VPS16Q9H269 839 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 TAB2Q9NYJ8 693 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 KIAA1217Q5T5P2 1943 aa18.86■□□□□ 0.61
PCDHB17P-201ENST00000539533 UNCXA6NJT0 531 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 C1orf186Q6ZWK4 172 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 MYOCDQ8IZQ8 938 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 DNERQ8NFT8 737 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 MS4A4AQ96JQ5 239 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 DESI2Q9BSY9 194 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 THAP9Q9H5L6 903 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 SFI1A8K8P3 1242 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 MAFGO15525 162 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 KCNA2P16389 499 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 SPAG1Q07617 926 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 NEK9Q8TD19 979 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 IWS1Q96ST2 819 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 ZSWIM4Q9H7M6 989 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 TELO2Q9Y4R8 837 aa18.85■□□□□ 0.61
PCDHB17P-201ENST00000539533 SOWAHBA6NEL2 793 aa18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 POTEB2H3BUK9 544 aa18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 ALDH5A1P51649 535 aaPredicted RBP18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 SFR1Q86XK3 245 aa18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 RABGGTAQ92696 567 aa18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 SORBS3O60504 671 aa18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 SLC25A27O95847 323 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms