RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 MAN1B1Q9UKM7 699 aa17.16■□□□□ 0.34
VAMP1-207ENST00000539047 IGSF9BQ9UPX0 1349 aa17.16■□□□□ 0.34
VAMP1-207ENST00000539047 PVALEFA0A1B0GWK0 134 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 ATG7O95352 703 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 YWHABP31946 246 aaKnown RBP17.15■□□□□ 0.34
VAMP1-207ENST00000539047 TCF7P36402 384 aaPredicted RBP17.15■□□□□ 0.34
VAMP1-207ENST00000539047 PPP1R2P41236 205 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 ADCYAP1R1P41586 468 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 SLC12A3P55017 1021 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 PRMT2P55345 433 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 PRKCEQ02156 737 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 TNFAIP2Q03169 654 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 PRKCZQ05513 592 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 CCDC144BQ3MJ40 725 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 DUSP28Q4G0W2 176 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 BRDTQ58F21 947 aaPredicted RBP17.15■□□□□ 0.34
VAMP1-207ENST00000539047 UNC13DQ70J99 1090 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 MLKLQ8NB16 471 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 OR6J1Q8NGC5 347 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 SPATA20Q8TB22 786 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 PIGOQ8TEQ8 1089 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 DDX12PQ92771 950 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 EMID1Q96A84 441 aaPredicted RBP17.15■□□□□ 0.34
VAMP1-207ENST00000539047 FUCA2Q9BTY2 467 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 TIPINQ9BVW5 301 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 KATNBL1Q9H079 304 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 FAM184BQ9ULE4 1060 aa17.15■□□□□ 0.34
VAMP1-207ENST00000539047 MYMKA6NI61 221 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 CTGFP29279 349 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 CYP2C19P33261 490 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 SARSP49591 514 aaKnown RBP17.14■□□□□ 0.33
VAMP1-207ENST00000539047 SLC26A2P50443 739 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 TPM4P67936 248 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 CCL14Q16627 93 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 XKR9Q5GH70 373 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 XKR3Q5GH77 459 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 DYMQ7RTS9 669 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 CCDC60Q8IWA6 550 aaPredicted RBP17.14■□□□□ 0.33
VAMP1-207ENST00000539047 PPTC7Q8NI37 304 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 RAET1EQ8TD07 263 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 GLG1Q92896 1179 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 GPR20Q99678 358 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 MTRQ99707 1265 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 SRRDQ9UH36 339 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 SEPT9Q9UHD8 586 aaPredicted RBP17.14■□□□□ 0.33
VAMP1-207ENST00000539047 EMSYQ7Z589 1322 aa17.14■□□□□ 0.33
VAMP1-207ENST00000539047 OATP04181 439 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 AKR1A1P14550 325 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 CYP11B2P19099 503 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 CASP1P29466 404 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 ZNF165P49910 485 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 STAT5BP51692 787 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 PSMC6P62333 389 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 ARHGAP1Q07960 439 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 MORC3Q14149 939 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 UGCGQ16739 394 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 KMT5BQ4FZB7 885 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 L1TD1Q5T7N2 865 aaKnown RBP17.13■□□□□ 0.33
VAMP1-207ENST00000539047 ZNF658Q5TYW1 1059 aaPredicted RBP17.13■□□□□ 0.33
VAMP1-207ENST00000539047 ISM2Q6H9L7 571 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 FAM200AQ8TCP9 573 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 AFAP1L1Q8TED9 768 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 LRRC15Q8TF66 581 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 AP5M1Q9H0R1 490 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 DNAJC25Q9H1X3 360 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 ZHX3Q9H4I2 956 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 SMARCAD1Q9H4L7 1026 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 NRBP2Q9NSY0 501 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 PANK4Q9NVE7 773 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 FLRT1Q9NZU1 646 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 ZNF215Q9UL58 517 aaPredicted RBP17.13■□□□□ 0.33
VAMP1-207ENST00000539047 ODF2LQ9ULJ1 636 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 GABRQQ9UN88 632 aa17.13■□□□□ 0.33
VAMP1-207ENST00000539047 GSTTP1A0A1W2PQM5 241 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 BECN2A8MW95 431 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 GOLGA6L19H0YKK7 550 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 RHOBTB3O94955 611 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 FAM13AO94988 1023 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 KIF20AO95235 890 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 GAP43P17677 238 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 PSMD2Q13200 908 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 DPCR1Q3MIW9 517 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 CT47A1Q5JQC4 288 aaPredicted RBP17.12■□□□□ 0.33
VAMP1-207ENST00000539047 UTP14CQ5TAP6 766 aaKnown RBP17.12■□□□□ 0.33
VAMP1-207ENST00000539047 COPS5Q92905 334 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 ABHD8Q96I13 439 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 WRAP73Q9P2S5 460 aaPredicted RBP17.12■□□□□ 0.33
VAMP1-207ENST00000539047 PPME1Q9Y570 386 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 COL4A3BPQ9Y5P4 624 aa17.12■□□□□ 0.33
VAMP1-207ENST00000539047 MAFBQ9Y5Q3 323 aaPredicted RBP17.12■□□□□ 0.33
VAMP1-207ENST00000539047 IGKV6D-21A0A0A0MT36 114 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 HMGCRP04035 888 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 ZNF865P0CJ78 1059 aaPredicted RBP17.11■□□□□ 0.33
VAMP1-207ENST00000539047 SMPD1P17405 629 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 RARRES1P49788 294 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 CPT1AP50416 773 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 DGKDQ16760 1214 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 HSDL1Q3SXM5 330 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 RINT1Q6NUQ1 792 aa17.11■□□□□ 0.33
VAMP1-207ENST00000539047 PADI6Q6TGC4 694 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms