RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 AATKQ6ZMQ8 1374 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 ATP10BO94823 1461 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 FGGP02679 453 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 PDE6AP16499 860 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 CXCR5P32302 372 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 ACTN3Q08043 901 aaPredicted RBP7.42□□□□□ -1.22
SORT1-209ENST00000538502 MRPL28Q13084 256 aaKnown RBP7.42□□□□□ -1.22
SORT1-209ENST00000538502 KPNB1Q14974 876 aaKnown RBP7.42□□□□□ -1.22
SORT1-209ENST00000538502 CEP55Q53EZ4 464 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 GPATCH4Q5T3I0 446 aaKnown RBP7.42□□□□□ -1.22
SORT1-209ENST00000538502 POMGNT1Q8WZA1 660 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 PBXIP1Q96AQ6 731 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 TBK1Q9UHD2 729 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 UBE4BO95155 1302 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 H0Y626 953 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 ASAP2O43150 1006 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 TRIM16O95361 564 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 KRT75O95678 551 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 PYGLP06737 847 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 RAP1GDS1P52306 607 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 MAEAQ7L5Y9 396 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 RDH13Q8NBN7 331 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 CFAP36Q96G28 342 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 FOXP3Q9BZS1 431 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 DIABLOQ9NR28 239 aa7.42□□□□□ -1.22
SORT1-209ENST00000538502 STX18Q9P2W9 335 aaKnown RBP7.42□□□□□ -1.22
SORT1-209ENST00000538502 KLRF2D3W0D1 207 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 MED21Q13503 144 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 HIC1Q14526 733 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 SPOPLQ6IQ16 392 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 FBXO11Q86XK2 927 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 DDI1Q8WTU0 396 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 NACC1Q96RE7 527 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 NRBP2Q9NSY0 501 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 WARS2Q9UGM6 360 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 DDX39AO00148 427 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 NVLO15381 856 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 IFNA8P32881 189 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 LIFRP42702 1097 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 TRPC1P48995 793 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 BASP1P80723 227 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 HDLBPQ00341 1268 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 GOLGA8FQ08AF8 430 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 GOLGA8DPQ0D2H9 430 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 SCG3Q8WXD2 468 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 ALKBH8Q96BT7 664 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 MAML3Q96JK9 1138 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 UIMC1Q96RL1 719 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 NACA2Q9H009 215 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 CPSF1Q10570 1443 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 ZNF521Q96K83 1311 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 IL10P22301 178 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 EFTUD2Q15029 972 aaKnown RBP eCLIP7.41□□□□□ -1.227e-13■■■■□ 20.3
SORT1-209ENST00000538502 TRADDQ15628 312 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 XKR9Q5GH70 373 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 FBXO31Q5XUX0 539 aaPredicted RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 ALKBH5Q6P6C2 394 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 TRMT10CQ7L0Y3 403 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 DHX40Q8IX18 779 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 RIBC1Q8N443 379 aaPredicted RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 MTA3Q9BTC8 594 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 AP1M1Q9BXS5 423 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 GOLPH3LQ9H4A5 285 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 SAYSD1Q9NPB0 183 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 DDX56Q9NY93 547 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 TTLL3Q9Y4R7 772 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 ADGRG1Q9Y653 693 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 HNRNPCL2B2RXH8 293 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 CFLARO15519 480 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 GFPT2O94808 682 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 LCA5Q86VQ0 697 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 FAM161BQ96MY7 647 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 NSFL1CQ9UNZ2 370 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 ATP8B3O60423 1300 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 SLC26A4O43511 780 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 UFL1O94874 794 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 AARSP49588 968 aaKnown RBP eCLIP7.41□□□□□ -1.22
SORT1-209ENST00000538502 DEFA1P59665 94 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 DEFA3P59666 94 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 COPS2P61201 443 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 UNC13DQ70J99 1090 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 ROPN1BQ9BZX4 212 aaPredicted RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 CCDC134Q9H6E4 229 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 ROPN1Q9HAT0 212 aaPredicted RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 AS3MTQ9HBK9 375 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 DONSONQ9NYP3 566 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 SUCLA2Q9P2R7 463 aaPredicted RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 BLOC1S6Q9UL45 172 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 KIAA1024Q9UPX6 916 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.41□□□□□ -1.22
SORT1-209ENST00000538502 MAGEA13PA6NCF6 341 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 CFBP00751 764 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 GPC5P78333 572 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 SP4Q02446 784 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 INPP5AQ14642 412 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 ODR4Q5SWX8 454 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 RASSF3Q86WH2 238 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 TTLL11Q8NHH1 800 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 DISC1Q9NRI5 854 aa7.41□□□□□ -1.22
SORT1-209ENST00000538502 STRIP2Q9ULQ0 834 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms