RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 GPR25O00155 361 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 LGR5O75473 907 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 CD44P16070 742 aaKnown RBP13.06□□□□□ -0.32
SPARC-207ENST00000537849 SMPD1P17405 629 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 CYP2C19P33261 490 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 FLT3LGP49771 235 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 ZNF165P49910 485 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 ASIC1P78348 528 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 EHHADHQ08426 723 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 LAMC2Q13753 1193 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 CCDC144BQ3MJ40 725 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 HSDL1Q3SXM5 330 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 DUSP28Q4G0W2 176 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 GJC2Q5T442 439 aaPredicted RBP13.06□□□□□ -0.32
SPARC-207ENST00000537849 ZNF658Q5TYW1 1059 aaPredicted RBP13.06□□□□□ -0.32
SPARC-207ENST00000537849 ANO5Q75V66 913 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 RNF214Q8ND24 703 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 APBA2Q99767 749 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 BPIFA3Q9BQP9 254 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 RUSC1Q9BVN2 902 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
SPARC-207ENST00000537849 RMND1Q9NWS8 449 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 MYH11P35749 1972 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 THSD7BQ9C0I4 1608 aa13.06□□□□□ -0.32
SPARC-207ENST00000537849 FRMD3A2A2Y4 597 aa13.05□□□□□ -0.32
SPARC-207ENST00000537849 DKC1O60832 514 aaKnown RBP eCLIP13.05□□□□□ -0.32
SPARC-207ENST00000537849 GH1P01241 217 aa13.05□□□□□ -0.32
SPARC-207ENST00000537849 YWHABP31946 246 aaKnown RBP13.05□□□□□ -0.32
SPARC-207ENST00000537849 RARRES1P49788 294 aa13.05□□□□□ -0.32
SPARC-207ENST00000537849 UVSSAQ2YD98 709 aa13.05□□□□□ -0.32
SPARC-207ENST00000537849 CT47A1Q5JQC4 288 aaPredicted RBP13.05□□□□□ -0.32
SPARC-207ENST00000537849 FAM200AQ8TCP9 573 aa13.05□□□□□ -0.32
SPARC-207ENST00000537849 AFAP1L1Q8TED9 768 aa13.05□□□□□ -0.32
SPARC-207ENST00000537849 ATP6V0A1Q93050 837 aa13.05□□□□□ -0.32
SPARC-207ENST00000537849 EMID1Q96A84 441 aaPredicted RBP13.05□□□□□ -0.32
SPARC-207ENST00000537849 SPATA33Q96N06 139 aa13.05□□□□□ -0.32
SPARC-207ENST00000537849 MED15Q96RN5 788 aa13.05□□□□□ -0.32
SPARC-207ENST00000537849 GRPEL1Q9HAV7 217 aa13.05□□□□□ -0.32
SPARC-207ENST00000537849 ZNF302Q9NR11 478 aa13.05□□□□□ -0.32
SPARC-207ENST00000537849 PCDHA2Q9Y5H9 948 aa13.05□□□□□ -0.32
SPARC-207ENST00000537849 ARHGEF35A5YM69 484 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 TMEM150BA6NC51 233 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 NKRFO15226 690 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPARC-207ENST00000537849 ADCY6O43306 1168 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 TCF7P36402 384 aaPredicted RBP13.04□□□□□ -0.32
SPARC-207ENST00000537849 PRCPP42785 496 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 MRE11P49959 708 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 STAT5BP51692 787 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 NPEPPSP55786 919 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 TNFAIP2Q03169 654 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 PRKCZQ05513 592 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 STK4Q13043 487 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 PSMD2Q13200 908 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 KIF22Q14807 665 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 XKR3Q5GH77 459 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 OTUD6AQ7L8S5 288 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 DHX40Q8IX18 779 aaKnown RBP13.04□□□□□ -0.32
SPARC-207ENST00000537849 SMYD4Q8IYR2 804 aaPredicted RBP13.04□□□□□ -0.32
SPARC-207ENST00000537849 TRPV1Q8NER1 839 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 CD99L2Q8TCZ2 262 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 HPS3Q969F9 1004 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 POLD4Q9HCU8 107 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 PDLIM7Q9NR12 457 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 PANK4Q9NVE7 773 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 SAGE1Q9NXZ1 904 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 ZHX1Q9UKY1 873 aaPredicted RBP13.04□□□□□ -0.32
SPARC-207ENST00000537849 GNEQ9Y223 722 aaKnown RBP13.04□□□□□ -0.32
SPARC-207ENST00000537849 GDAQ9Y2T3 454 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 IGSF9BQ9UPX0 1349 aa13.04□□□□□ -0.32
SPARC-207ENST00000537849 RSPH10B2B2RC85 870 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 BACH1O14867 736 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 RSPH10BP0C881 870 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 IDEP14735 1019 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 HSPA6P17066 643 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 GUCY2CP25092 1073 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
SPARC-207ENST00000537849 RAD51AP2Q09MP3 1159 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 COASYQ13057 564 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 NCAPHQ15003 741 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 COBLL1Q53SF7 1204 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 XKR9Q5GH70 373 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 FAM160B1Q5W0V3 765 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 PADI6Q6TGC4 694 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 PLPPR4Q7Z2D5 763 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 LUZP1Q86V48 1076 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 CCDC65Q8IXS2 484 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 ADSSL1Q8N142 457 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 AFG1LQ8WV93 481 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 CCDC47Q96A33 483 aaKnown RBP13.03□□□□□ -0.32
SPARC-207ENST00000537849 CEP89Q96ST8 783 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 REEP2Q9BRK0 252 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 NIFKQ9BYG3 293 aaKnown RBP13.03□□□□□ -0.32
SPARC-207ENST00000537849 GTPBP4Q9BZE4 634 aaKnown RBP13.03□□□□□ -0.32
SPARC-207ENST00000537849 NAT10Q9H0A0 1025 aaKnown RBP13.03□□□□□ -0.32
SPARC-207ENST00000537849 EXOC1Q9NV70 894 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 KCND2Q9NZV8 630 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 SRRDQ9UH36 339 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 CASP8AP2Q9UKL3 1982 aa13.03□□□□□ -0.32
SPARC-207ENST00000537849 ARID2Q68CP9 1835 aa13.02□□□□□ -0.32
SPARC-207ENST00000537849 SFI1A8K8P3 1242 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms