RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 DNM3Q9UQ16 869 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 MYADML2A6NDP7 307 aa17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 NKRFO15226 690 aaKnown RBP eCLIP17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 MMP3P08254 477 aa17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 LBX1P52954 281 aa17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 BEX3Q00994 111 aa17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 RBM43Q6ZSC3 357 aaKnown RBP17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 ANO5Q75V66 913 aa17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 C4orf19Q8IY42 314 aa17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 RUSC1Q9BVN2 902 aa17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 CUEDC2Q9H467 287 aa17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 POLD4Q9HCU8 107 aa17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 NRBP1Q9UHY1 535 aa17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 PTPN22Q9Y2R2 807 aa17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 MAFBQ9Y5Q3 323 aaPredicted RBP17.48■□□□□ 0.39
SFSWAP-206ENST00000537582 CTAGE5O15320 804 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 LGR5O75473 907 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 LYPLA2O95372 231 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 EYA4O95677 639 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 YWHABP31946 246 aaKnown RBP17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 GRK4P32298 578 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 STAT5BP51692 787 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 PRMT2P55345 433 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 NPEPPSP55786 919 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 RAD51AP2Q09MP3 1159 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 DPYDQ12882 1025 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 ARSHQ5FYA8 562 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 ISM2Q6H9L7 571 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 SV2BQ7L1I2 683 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 SLAIN1Q8ND83 568 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 ATP6V0A1Q93050 837 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 NACC1Q96RE7 527 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 PCDHA5Q9Y5H7 936 aa17.47■□□□□ 0.39
SFSWAP-206ENST00000537582 BIN1O00499 593 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 SEPT4O43236 478 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 PGK1P00558 417 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 LGALS2P05162 132 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 CYP11B2P19099 503 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 DYMQ7RTS9 669 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 GPBP1Q86WP2 473 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 SYT2Q8N9I0 419 aaPredicted RBP17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 AFAP1L1Q8TED9 768 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 PPP1R13LQ8WUF5 828 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 GLG1Q92896 1179 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 TRIM9Q9C026 710 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 BMP2KQ9NSY1 1161 aaPredicted RBP17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 KIAA1468Q9P260 1216 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 SYNRGQ9UMZ2 1314 aa17.46■□□□□ 0.39
SFSWAP-206ENST00000537582 GTPBP6O43824 516 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 MYCP01106 439 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 MUTP22033 750 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 RARRES1P49788 294 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 KANK3Q6NY19 840 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 ELOA2Q8IYF1 753 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 MAGEF1Q9HAY2 307 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 SEPT9Q9UHD8 586 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 EMSYQ7Z589 1322 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 WDR81Q562E7 1941 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 A6NJR5 290 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 DUSP11O75319 330 aaKnown RBP17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 OATP04181 439 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 FAM160B1Q5W0V3 765 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 DDX12PQ92771 950 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 C7orf25Q9BPX7 421 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 C16orf70Q9BSU1 422 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 AP5M1Q9H0R1 490 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 AZI2Q9H6S1 392 aa17.45■□□□□ 0.38
SFSWAP-206ENST00000537582 ARHGEF35A5YM69 484 aa17.44■□□□□ 0.38
SFSWAP-206ENST00000537582 KLRC4O43908 158 aa17.44■□□□□ 0.38
SFSWAP-206ENST00000537582 HOXD8P13378 290 aaPredicted RBP17.44■□□□□ 0.38
SFSWAP-206ENST00000537582 PLCB4Q15147 1175 aa17.44■□□□□ 0.38
SFSWAP-206ENST00000537582 XKR9Q5GH70 373 aa17.44■□□□□ 0.38
SFSWAP-206ENST00000537582 RINT1Q6NUQ1 792 aa17.44■□□□□ 0.38
SFSWAP-206ENST00000537582 DNAJC19Q96DA6 116 aa17.44■□□□□ 0.38
SFSWAP-206ENST00000537582 RNPEPQ9H4A4 650 aa17.44■□□□□ 0.38
SFSWAP-206ENST00000537582 TUBE1Q9UJT0 475 aa17.44■□□□□ 0.38
SFSWAP-206ENST00000537582 DBR1Q9UK59 544 aaKnown RBP17.44■□□□□ 0.38
SFSWAP-206ENST00000537582 MAN1B1Q9UKM7 699 aa17.44■□□□□ 0.38
SFSWAP-206ENST00000537582 RSPH10B2B2RC85 870 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 USO1O60763 962 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 PPFIA4O75335 1185 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 C6orf222P0C671 652 aaPredicted RBP17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 RSPH10BP0C881 870 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 RARBP10826 455 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 BMP6P22004 513 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 SARSP49591 514 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 ASIC1P78348 528 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 FSCN1Q16658 493 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 DGKDQ16760 1214 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 MTERF2Q49AM1 385 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 XKR3Q5GH77 459 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 PADI6Q6TGC4 694 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 C1orf186Q6ZWK4 172 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 MAEAQ7L5Y9 396 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 PLPPR4Q7Z2D5 763 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 SPATA20Q8TB22 786 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 HPS3Q969F9 1004 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 SMARCE1Q969G3 411 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 ZBTB10Q96DT7 871 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms