RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 SGPL1O95470 568 aa27.13■■□□□ 1.93
HMGA2-208ENST00000537429 F2P00734 622 aa27.13■■□□□ 1.93
HMGA2-208ENST00000537429 TFRCP02786 760 aaKnown RBP27.13■■□□□ 1.93
HMGA2-208ENST00000537429 MYL3P08590 195 aa27.13■■□□□ 1.93
HMGA2-208ENST00000537429 PDILTQ8N807 584 aa27.13■■□□□ 1.93
HMGA2-208ENST00000537429 RASSF8Q8NHQ8 419 aa27.13■■□□□ 1.93
HMGA2-208ENST00000537429 KAT2BQ92831 832 aa27.13■■□□□ 1.93
HMGA2-208ENST00000537429 PLIN2Q99541 437 aa27.13■■□□□ 1.93
HMGA2-208ENST00000537429 TUT1Q9H6E5 874 aaKnown RBP27.13■■□□□ 1.93
HMGA2-208ENST00000537429 STBD1O95210 358 aa27.12■■□□□ 1.93
HMGA2-208ENST00000537429 ASGR1P07306 291 aa27.12■■□□□ 1.93
HMGA2-208ENST00000537429 PLCG1P19174 1290 aa27.12■■□□□ 1.93
HMGA2-208ENST00000537429 U2AF1L4Q8WU68 220 aaKnown RBP27.12■■□□□ 1.93
HMGA2-208ENST00000537429 TSEN34Q9BSV6 310 aaKnown RBP27.12■■□□□ 1.93
HMGA2-208ENST00000537429 ZNF215Q9UL58 517 aaPredicted RBP27.12■■□□□ 1.93
HMGA2-208ENST00000537429 POLR2DO15514 142 aaKnown RBP27.11■■□□□ 1.93
HMGA2-208ENST00000537429 PRKCEQ02156 737 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 RRAGBQ5VZM2 374 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 CCDC73Q6ZRK6 1079 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 KCNK18Q7Z418 384 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 ENGASEQ8NFI3 743 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 LRRC15Q8TF66 581 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 NACC1Q96RE7 527 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 DDX11L8A8MPP1 907 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 ZBTB39O15060 712 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 LIG1P18858 919 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 MARK3P27448 753 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 SYKP43405 635 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 GJA8P48165 433 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 PSMC6P62333 389 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 E2F4Q16254 413 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 NAALADL2Q58DX5 795 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 XKR3Q5GH77 459 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 CXCL17Q6UXB2 119 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 MTG1Q9BT17 334 aaPredicted RBP27.11■■□□□ 1.93
HMGA2-208ENST00000537429 RNPEPQ9H4A4 650 aa27.11■■□□□ 1.93
HMGA2-208ENST00000537429 A0A087WWV3 80 aa27.1■■□□□ 1.93
HMGA2-208ENST00000537429 MOXD2PA6NHM9 499 aa27.1■■□□□ 1.93
HMGA2-208ENST00000537429 HAS3O00219 553 aa27.1■■□□□ 1.93
HMGA2-208ENST00000537429 OATP04181 439 aa27.1■■□□□ 1.93
HMGA2-208ENST00000537429 XRCC6P12956 609 aaKnown RBP eCLIP27.1■■□□□ 1.93
HMGA2-208ENST00000537429 YWHABP31946 246 aaKnown RBP27.1■■□□□ 1.93
HMGA2-208ENST00000537429 SNW1Q13573 536 aaKnown RBP27.1■■□□□ 1.93
HMGA2-208ENST00000537429 PLCB4Q15147 1175 aa27.1■■□□□ 1.93
HMGA2-208ENST00000537429 ANO5Q75V66 913 aa27.1■■□□□ 1.93
HMGA2-208ENST00000537429 CKAP2LQ8IYA6 745 aa27.1■■□□□ 1.93
HMGA2-208ENST00000537429 FMR1NBQ8N0W7 255 aaPredicted RBP27.1■■□□□ 1.93
HMGA2-208ENST00000537429 PIGOQ8TEQ8 1089 aa27.1■■□□□ 1.93
HMGA2-208ENST00000537429 PYM1Q9BRP8 204 aaKnown RBP27.1■■□□□ 1.93
HMGA2-208ENST00000537429 DNM3Q9UQ16 869 aa27.1■■□□□ 1.93
HMGA2-208ENST00000537429 KBTBD13C9JR72 458 aa27.09■■□□□ 1.93
HMGA2-208ENST00000537429 E9PMD0 336 aa27.09■■□□□ 1.93
HMGA2-208ENST00000537429 DNM1LO00429 736 aa27.09■■□□□ 1.93
HMGA2-208ENST00000537429 ACLYP53396 1101 aa27.09■■□□□ 1.93
HMGA2-208ENST00000537429 CHMP4BP1P59074 171 aa27.09■■□□□ 1.93
HMGA2-208ENST00000537429 FAM160A1Q05DH4 1040 aa27.09■■□□□ 1.93
HMGA2-208ENST00000537429 TRMT1LQ7Z2T5 733 aaKnown RBP27.09■■□□□ 1.93
HMGA2-208ENST00000537429 IQUBQ8NA54 791 aa27.09■■□□□ 1.93
HMGA2-208ENST00000537429 ATP8B4Q8TF62 1192 aa27.09■■□□□ 1.93
HMGA2-208ENST00000537429 BBXQ8WY36 941 aaPredicted RBP27.09■■□□□ 1.93
HMGA2-208ENST00000537429 FAM167AQ96KS9 214 aa27.09■■□□□ 1.93
HMGA2-208ENST00000537429 KATNAL1Q9BW62 490 aa27.09■■□□□ 1.93
HMGA2-208ENST00000537429 BLOC1S4Q9NUP1 217 aa27.09■■□□□ 1.93
HMGA2-208ENST00000537429 STK17AQ9UEE5 414 aa27.09■■□□□ 1.93
HMGA2-208ENST00000537429 STAT6P42226 847 aa27.08■■□□□ 1.93
HMGA2-208ENST00000537429 DHX58Q96C10 678 aa27.08■■□□□ 1.93
HMGA2-208ENST00000537429 NRBP2Q9NSY0 501 aa27.08■■□□□ 1.93
HMGA2-208ENST00000537429 ANKEF1Q9NU02 776 aa27.08■■□□□ 1.93
HMGA2-208ENST00000537429 NR1I2O75469 434 aa27.07■■□□□ 1.92
HMGA2-208ENST00000537429 ZNF202O95125 648 aa27.07■■□□□ 1.92
HMGA2-208ENST00000537429 PSEN2P49810 448 aa27.07■■□□□ 1.92
HMGA2-208ENST00000537429 MFSD10Q14728 455 aa27.07■■□□□ 1.92
HMGA2-208ENST00000537429 KIAA0753Q2KHM9 967 aa27.07■■□□□ 1.92
HMGA2-208ENST00000537429 OTUD6AQ7L8S5 288 aa27.07■■□□□ 1.92
HMGA2-208ENST00000537429 NIFKQ9BYG3 293 aaKnown RBP27.07■■□□□ 1.92
HMGA2-208ENST00000537429 DBR1Q9UK59 544 aaKnown RBP27.07■■□□□ 1.92
HMGA2-208ENST00000537429 TMEM150BA6NC51 233 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 HBP1O60381 514 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 CABYRO75952 493 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 EYA4O95677 639 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 LONRF3Q496Y0 759 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 RAD54LQ92698 747 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 VTI1AQ96AJ9 217 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 CUEDC2Q9H467 287 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 SEPT9Q9UHD8 586 aaPredicted RBP27.06■■□□□ 1.92
HMGA2-208ENST00000537429 PHF24Q9UPV7 400 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 SCN10AQ9Y5Y9 1956 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 RARRES1P49788 294 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 GPT2Q8TD30 523 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 LARP4BQ92615 738 aaKnown RBP27.06■■□□□ 1.92
HMGA2-208ENST00000537429 USP25Q9UHP3 1055 aa27.06■■□□□ 1.92
HMGA2-208ENST00000537429 ACTN4O43707 911 aaKnown RBP27.05■■□□□ 1.92
HMGA2-208ENST00000537429 CAPN2P17655 700 aa27.05■■□□□ 1.92
HMGA2-208ENST00000537429 MNX1P50219 401 aaPredicted RBP27.05■■□□□ 1.92
HMGA2-208ENST00000537429 NFKBIBQ15653 356 aa27.05■■□□□ 1.92
HMGA2-208ENST00000537429 PLA2G4FQ68DD2 849 aa27.05■■□□□ 1.92
HMGA2-208ENST00000537429 SYT2Q8N9I0 419 aaPredicted RBP27.05■■□□□ 1.92
HMGA2-208ENST00000537429 BHMT2Q9H2M3 363 aa27.05■■□□□ 1.92
HMGA2-208ENST00000537429 SERTAD1Q9UHV2 236 aa27.05■■□□□ 1.92
HMGA2-208ENST00000537429 TRPC6Q9Y210 931 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms