RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 GDAQ9Y2T3 454 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 PCDHA13Q9Y5I0 950 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 V9GY48 417 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-216ENST00000536548 ARAP2Q8WZ64 1704 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 TCP10L2B9ZVM9 353 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 ZNF185O15231 689 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 AKR1B10O60218 316 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 BCRP11274 1271 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 SCG2P13521 617 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 NR1D1P20393 614 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 FGFR2P21802 821 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 KIF5BP33176 963 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 LSP1P33241 339 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 TNNC1P63316 161 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 AMPD3Q01432 767 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 ACTN3Q08043 901 aaPredicted RBP8.55□□□□□ -1.04
CPSF7-216ENST00000536548 IFFO1Q0D2I5 559 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 PDCLQ13371 301 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 PTGISQ16647 500 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 TTMPQ5BVD1 217 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 NAA35Q5VZE5 725 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 FBXW10Q5XX13 1052 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 HAUS3Q68CZ6 603 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 KCNV1Q6PIU1 500 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 DTHD1Q6ZMT9 781 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 CCDC84Q86UT8 332 aaPredicted RBP8.55□□□□□ -1.04
CPSF7-216ENST00000536548 ERO1BQ86YB8 467 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 ZSCAN29Q8IWY8 852 aaPredicted RBP8.55□□□□□ -1.04
CPSF7-216ENST00000536548 ANKLE1Q8NAG6 615 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 PXYLP1Q8TE99 480 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 ZNF473Q8WTR7 871 aaKnown RBP8.55□□□□□ -1.04
CPSF7-216ENST00000536548 ZBTB9Q96C00 473 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 ATP6V1G3Q96LB4 118 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 CNOT6LQ96LI5 555 aaKnown RBP8.55□□□□□ -1.04
CPSF7-216ENST00000536548 AK8Q96MA6 479 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 GDAP1L1Q96MZ0 367 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 ZIM3Q96PE6 472 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 NOX5Q96PH1 765 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 NOC4LQ9BVI4 516 aaKnown RBP8.55□□□□□ -1.04
CPSF7-216ENST00000536548 LACRTQ9GZZ8 138 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 TDRD3Q9H7E2 651 aaKnown RBP8.55□□□□□ -1.04
CPSF7-216ENST00000536548 VCPKMTQ9H867 229 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 GDF3Q9NR23 364 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 LRWD1Q9UFC0 647 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 CEP83Q9Y592 693 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 CACNA1AO00555 2505 aa8.55□□□□□ -1.04
CPSF7-216ENST00000536548 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 TCF20Q9UGU0 1960 aaKnown RBP8.54□□□□□ -1.04
CPSF7-216ENST00000536548 MAGEB6P1A0A0J9YX57 407 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 SSU72P8A0A1W2PR75 194 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 SNAP23O00161 211 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 FAM107AO95990 144 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 MCM7P33993 719 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 MDH1P40925 334 aaKnown RBP8.54□□□□□ -1.04
CPSF7-216ENST00000536548 PRPHP41219 470 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 UBA7P41226 1012 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 MAGEA1P43355 309 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 KIF11P52732 1056 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 TRIM32Q13049 653 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 MOGSQ13724 837 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 SKIDA1Q1XH10 827 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 LRRC26Q2I0M4 334 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 CCDC40Q4G0X9 1142 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 PREPLQ4J6C6 727 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-216ENST00000536548 EARS2Q5JPH6 523 aaKnown RBP8.54□□□□□ -1.04
CPSF7-216ENST00000536548 RNF187Q5TA31 235 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-216ENST00000536548 GALNT17Q6IS24 598 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 CNNM4Q6P4Q7 775 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 RUFY4Q6ZNE9 571 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 PIK3AP1Q6ZUJ8 805 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 CCDC121Q6ZUS5 278 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 NLRP14Q86W24 1093 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 IQCKQ8N0W5 287 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
CPSF7-216ENST00000536548 LCORLQ8N3X6 602 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 MAGEC3Q8TD91 643 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 ADAMTS19Q8TE59 1207 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 ARL8AQ96BM9 186 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 LRRC45Q96CN5 670 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 RRP36Q96EU6 259 aaKnown RBP8.54□□□□□ -1.04
CPSF7-216ENST00000536548 CCDC43Q96MW1 224 aaKnown RBP8.54□□□□□ -1.04
CPSF7-216ENST00000536548 WRNIP1Q96S55 665 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 MTRQ99707 1265 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 GREM2Q9H772 168 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 INCENPQ9NQS7 918 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 ZNF70Q9UC06 446 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-216ENST00000536548 DMGDHQ9UI17 866 aaKnown RBP8.54□□□□□ -1.04
CPSF7-216ENST00000536548 PLAGL2Q9UPG8 496 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 SAMM50Q9Y512 469 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 TACC3Q9Y6A5 838 aa8.54□□□□□ -1.04
CPSF7-216ENST00000536548 CHD9Q3L8U1 2897 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 CCDC194A0A1B0GVG4 234 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 TRIM49BA6NDI0 452 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 RCCD1A6NED2 376 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 MINDY4BA8MYZ0 360 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 CES2O00748 559 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 KLRC4O43908 158 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 COBLO75128 1261 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 PRDM1O75626 825 aa8.53□□□□□ -1.04
CPSF7-216ENST00000536548 MOCS3O95396 460 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms