RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 SLC26A2P50443 739 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 ERVK-21P61565 698 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 HTRA4P83105 476 aaPredicted RBP16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 FBXO47Q5MNV8 452 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 IER5Q5VY09 327 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 CPLX2Q6PUV4 134 aaKnown RBP16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 CKAP2LQ8IYA6 745 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 ATXN2LQ8WWM7 1075 aaKnown RBP16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 SYMPKQ92797 1274 aaKnown RBP16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 AIFM3Q96NN9 605 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 C17orf80Q9BSJ5 609 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 SUGCTQ9HAC7 445 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 SH3GLB2Q9NR46 395 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 TBC1D22BQ9NU19 505 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 PCDHA2Q9Y5H9 948 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 COL4A4P53420 1690 aaPredicted RBP16.21■□□□□ 0.18
RTN3P1-201ENST00000536295 SIP14410 1827 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 HBP1O60381 514 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 DEXIO95424 95 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 KLRC1P26715 233 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 CD52P31358 61 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 CIITAP33076 1130 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 MRPS5P82675 430 aaKnown RBP16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 MTHFD1LQ6UB35 978 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 TSHZ1Q6ZSZ6 1077 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 ATP8B4Q8TF62 1192 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 ASB2Q96Q27 587 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 AGO3Q9H9G7 860 aaKnown RBP16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 PCDHA4Q9UN74 947 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 SAMM50Q9Y512 469 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 TRPV2Q9Y5S1 764 aa16.2■□□□□ 0.18
RTN3P1-201ENST00000536295 DTNBO60941 627 aa16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 RPLP2P05387 115 aaKnown RBP16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 PSAPP07602 524 aa16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 KRT76Q01546 638 aa16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 TFF2Q03403 129 aa16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 ZNF746Q6NUN9 644 aaPredicted RBP16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 FBXO22Q8NEZ5 403 aa16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 SP7Q8TDD2 431 aaPredicted RBP16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 TBCKQ8TEA7 893 aa16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 LENG9Q96B70 501 aa16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 GINS2Q9Y248 185 aa16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 VCANP13611 3396 aa16.19■□□□□ 0.18
RTN3P1-201ENST00000536295 PRRC2BQ5JSZ5 2229 aaKnown RBP16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 SMIM35A0A1B0GVV1 85 aa16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 ENPP3O14638 875 aa16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 MSH4O15457 936 aa16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 EDIL3O43854 480 aa16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 ATP4AP20648 1035 aa16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 SCRN1Q12765 414 aa16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 SMAP1Q8IYB5 467 aaPredicted RBP16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 BLIDQ8IZY5 108 aa16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 IL27Q8NEV9 243 aa16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 GJA10Q969M2 543 aa16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 CELF4Q9BZC1 486 aaKnown RBP16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 SLKQ9H2G2 1235 aaPredicted RBP16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 GABBR1Q9UBS5 961 aa16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 PCDHA10Q9Y5I2 948 aa16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 CUL9Q8IWT3 2517 aa16.18■□□□□ 0.18
RTN3P1-201ENST00000536295 CHMP2AO43633 222 aa16.17■□□□□ 0.18
RTN3P1-201ENST00000536295 USP11P51784 963 aa16.17■□□□□ 0.18
RTN3P1-201ENST00000536295 EPC2Q52LR7 807 aa16.17■□□□□ 0.18
RTN3P1-201ENST00000536295 ZNF484Q5JVG2 852 aa16.17■□□□□ 0.18
RTN3P1-201ENST00000536295 IL17RAQ96F46 866 aa16.17■□□□□ 0.18
RTN3P1-201ENST00000536295 PPP1R16BQ96T49 567 aa16.17■□□□□ 0.18
RTN3P1-201ENST00000536295 TPCN1Q9ULQ1 816 aa16.17■□□□□ 0.18
RTN3P1-201ENST00000536295 KCNJ14Q9UNX9 436 aa16.17■□□□□ 0.18
RTN3P1-201ENST00000536295 MAFBQ9Y5Q3 323 aaPredicted RBP16.17■□□□□ 0.18
RTN3P1-201ENST00000536295 TRANK1O15050 2925 aa16.17■□□□□ 0.18
RTN3P1-201ENST00000536295 COL1A2P08123 1366 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 WDR64B1ANS9 1081 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 ZBTB42B2RXF5 422 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 GAS7O60861 476 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 CDKL5O76039 1030 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 TDP2O95551 362 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 IBSPP21815 317 aaPredicted RBP16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 AK2P54819 239 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 PAK2Q13177 524 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 TMEM266Q2M3C6 531 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 LRCH2Q5VUJ6 765 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 NME8Q8N427 588 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 ADAMTS19Q8TE59 1207 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 LINC01599Q8WXQ3 324 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 BBXQ8WY36 941 aaPredicted RBP16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 TEKT3Q9BXF9 490 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 C22orf23Q9BZE7 217 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 DISC1Q9NRI5 854 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 PADI3Q9ULW8 664 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 IGSF9BQ9UPX0 1349 aa16.16■□□□□ 0.18
RTN3P1-201ENST00000536295 REV3LO60673 3130 aa16.15■□□□□ 0.18
RTN3P1-201ENST00000536295 C22orf31O95567 290 aa16.15■□□□□ 0.18
RTN3P1-201ENST00000536295 KCNQ1P51787 676 aa16.15■□□□□ 0.18
RTN3P1-201ENST00000536295 NFX1Q12986 1120 aaKnown RBP16.15■□□□□ 0.18
RTN3P1-201ENST00000536295 NPY5RQ15761 445 aa16.15■□□□□ 0.18
RTN3P1-201ENST00000536295 TMEM192Q8IY95 271 aa16.15■□□□□ 0.18
RTN3P1-201ENST00000536295 KIAA0319LQ8IZA0 1049 aa16.15■□□□□ 0.18
RTN3P1-201ENST00000536295 FIBCD1Q8N539 461 aa16.15■□□□□ 0.18
RTN3P1-201ENST00000536295 METTL13Q8N6R0 699 aa16.15■□□□□ 0.18
RTN3P1-201ENST00000536295 DAGLBQ8NCG7 672 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms