RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 EPHB4P54760 987 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 PPP4CP60510 307 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 KLC1Q07866 573 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 SFSWAPQ12872 951 aaKnown RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 G3BP1Q13283 466 aaKnown RBP eCLIP4.06□□□□□ -1.76
MCF2-210ENST00000536274 ZNF268Q14587 947 aaPredicted RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 CCDC38Q502W7 563 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 TMEM214Q6NUQ4 689 aaKnown RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 ZC3H18Q86VM9 953 aaKnown RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 DNAAF5Q86Y56 855 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 SCUBE1Q8IWY4 988 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 ZNF713Q8N859 430 aaPredicted RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 ATP11CQ8NB49 1132 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 CCDC197Q8NCU1 140 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 UBLCP1Q8WVY7 318 aaPredicted RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 UTP4Q969X6 686 aaKnown RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 ANKRD27Q96NW4 1050 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 NEK1Q96PY6 1258 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 TM6SF1Q9BZW5 370 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 TAF1DQ9H5J8 278 aaPredicted RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 DDX18Q9NVP1 670 aaKnown RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 TUBE1Q9UJT0 475 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 SLC12A4Q9UP95 1085 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 DAAM1Q9Y4D1 1078 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 SLC4A7Q9Y6M7 1214 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 RBBP6Q7Z6E9 1792 aaKnown RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 ZNF609O15014 1411 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 MYH1P12882 1939 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 F8VZ95 297 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 NKRFO15226 690 aaKnown RBP eCLIP4.06□□□□□ -1.76
MCF2-210ENST00000536274 POLR2DO15514 142 aaKnown RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 COL6A2P12110 1019 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 KCNA3P22001 575 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 CCND1P24385 295 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 MLH1P40692 756 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 PTPN5P54829 565 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 CYP4A11Q02928 519 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 UAP1Q16222 522 aaPredicted RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 CDC37Q16543 378 aaPredicted RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 C8orf74Q6P047 294 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 TMEM53Q6P2H8 277 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 CRELD2Q6UXH1 353 aaPredicted RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 RUFY4Q6ZNE9 571 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 TRPM8Q7Z2W7 1104 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 ZBTB8BQ8NAP8 495 aaPredicted RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 SMC1BQ8NDV3 1235 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 DTX3LQ8TDB6 740 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 HSPBAP1Q96EW2 488 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 KRT12Q99456 494 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 PRMT1Q99873 361 aaKnown RBP4.06□□□□□ -1.76
MCF2-210ENST00000536274 FSD1Q9BTV5 496 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 NUP85Q9BW27 656 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 USP44Q9H0E7 712 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 TMBIM4Q9HC24 238 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 TFCP2L1Q9NZI6 479 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 WWC3Q9ULE0 1092 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 DOLKQ9UPQ8 538 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 TIMM22Q9Y584 194 aa4.06□□□□□ -1.76
MCF2-210ENST00000536274 A0A0J9YVX5 310 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 A0A1B0GTH6 734 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 LRRC37AA6NMS7 1700 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 GNPATO15228 680 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 AKR1B10O60218 316 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 ATP9AO75110 1047 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 ITGBL1O95965 494 aaPredicted RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 CYP21A2P08686 494 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 CHN1P15882 459 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 GNAZP19086 355 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 PSMA5P28066 241 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 HSD17B3P37058 310 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 OXCT1P55809 520 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 SOGA3Q5TF21 947 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 ANO1Q5XXA6 986 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 FAM117BQ6P1L5 589 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 C1orf228Q6PIY5 440 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 BRAPQ7Z569 592 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 LMNTD2Q8IXW0 634 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 RNF168Q8IYW5 571 aaPredicted RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 SIX5Q8N196 739 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 MAELQ96JY0 434 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 ZFRQ96KR1 1074 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 SIKE1Q9BRV8 207 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 TMUB1Q9BVT8 246 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 TRIM31Q9BZY9 425 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 CCDC113Q9H0I3 377 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 GOLPH3Q9H4A6 298 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 SNRKQ9NRH2 765 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 CEP72Q9P209 647 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 LRWD1Q9UFC0 647 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 ZNF330Q9Y3S2 320 aaPredicted RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 TTC26A0AVF1 554 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 TSPY2A6NKD2 308 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 PSMD14O00487 310 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 USO1O60763 962 aaKnown RBP4.05□□□□□ -1.76
MCF2-210ENST00000536274 E2F6O75461 281 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 CSPG5O95196 566 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 TSPY3P0CV98 308 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 TSPY8P0CW00 308 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 MCM3P25205 808 aa4.05□□□□□ -1.76
MCF2-210ENST00000536274 IARSP41252 1262 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms