RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 NRAPQ86VF7 1730 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 ABCB11O95342 1321 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 SPATA31A5Q5VU36 1347 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 SPATA31A7Q8IWB4 1347 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 ESYT2A0FGR8 921 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 SERTM1A2A2V5 107 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 KRBA1A5PL33 1030 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 RECKO95980 971 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 OR52Z1P0C646 297 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 PRLRP16471 622 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 NPR3P17342 541 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 ACTN2P35609 894 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 UBA7P41226 1012 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 AARSP49588 968 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS33A-203ENST00000536212 HIRAP54198 1017 aaPredicted RBP6.37□□□□□ -1.39
VPS33A-203ENST00000536212 ARHGAP4P98171 946 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 ITIH3Q06033 890 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 SLC20A2Q08357 652 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 ECM1Q16610 540 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 TSNAXIP1Q2TAA8 658 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 MIIPQ5JXC2 388 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 TBC1D9BQ66K14 1250 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 CENPPQ6IPU0 288 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 CNNM4Q6P4Q7 775 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 POTEAQ6S8J7 498 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 KRT25Q7Z3Z0 450 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 CABP7Q86V35 215 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 CERS3Q8IU89 383 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 ANKRD13AQ8IZ07 590 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 NEK11Q8NG66 645 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 WDR66Q8TBY9 1149 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 RASGRP4Q8TDF6 673 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 RUBCNQ92622 972 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 CCDC47Q96A33 483 aaKnown RBP6.37□□□□□ -1.39
VPS33A-203ENST00000536212 JAKMIP2Q96AA8 810 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 ACDQ96AP0 544 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 ACSBG1Q96GR2 724 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 TUBGCP2Q9BSJ2 902 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 TSGA10Q9BZW7 698 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 TRIM9Q9C026 710 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 SAP130Q9H0E3 1048 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 ACBD3Q9H3P7 528 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 ZNF395Q9H8N7 513 aaPredicted RBP6.37□□□□□ -1.39
VPS33A-203ENST00000536212 PDE11AQ9HCR9 933 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 MED4Q9NPJ6 270 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 MCM9Q9NXL9 1143 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 TRIM10Q9UDY6 481 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 NARFQ9UHQ1 456 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 ZNF232Q9UNY5 417 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 SAR1BQ9Y6B6 198 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 MYH14Q7Z406 1995 aaKnown RBP6.37□□□□□ -1.39
VPS33A-203ENST00000536212 MYH6P13533 1939 aa6.37□□□□□ -1.39
VPS33A-203ENST00000536212 PVALEFA0A1B0GWK0 134 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 PP2D1A8MPX8 630 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 B4DLN1 442 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 EML1O00423 815 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 KRT86O43790 486 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 RPS6KA4O75676 772 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 LCA5LO95447 670 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 TFRCP02786 760 aaKnown RBP6.36□□□□□ -1.39
VPS33A-203ENST00000536212 ATP1A1P05023 1023 aaKnown RBP6.36□□□□□ -1.39
VPS33A-203ENST00000536212 LDHCP07864 332 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 FURINP09958 794 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 RHOXF2BP0C7M4 288 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 PLCG1P19174 1290 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 MPSTP25325 297 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 NOS2P35228 1153 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 VAV2P52735 878 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 IRX3P78415 501 aaPredicted RBP6.36□□□□□ -1.39
VPS33A-203ENST00000536212 GSTO1P78417 241 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 AMPD3Q01432 767 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 TBC1D8BQ0IIM8 1120 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 NONOQ15233 471 aaKnown RBP eCLIP6.36□□□□□ -1.39
VPS33A-203ENST00000536212 ZSCAN26Q16670 478 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 TXNRD1Q16881 649 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 INF2Q27J81 1249 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 MAP9Q49MG5 647 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 COX20Q5RI15 118 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 CCDC122Q5T0U0 273 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 ANKRD40Q6AI12 368 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 NCAPH2Q6IBW4 605 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 TMEM214Q6NUQ4 689 aaKnown RBP6.36□□□□□ -1.39
VPS33A-203ENST00000536212 ARHGAP27Q6ZUM4 889 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 MMGT1Q8N4V1 131 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 CSGALNACT2Q8N6G5 542 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 ZDHHC1Q8WTX9 485 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 ZNF837Q96EG3 531 aaPredicted RBP6.36□□□□□ -1.39
VPS33A-203ENST00000536212 DYNLL2Q96FJ2 89 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 NGLY1Q96IV0 654 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 TMEM47Q9BQJ4 181 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 RHOXF2Q9BQY4 288 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 MMTAG2Q9BU76 263 aaKnown RBP6.36□□□□□ -1.39
VPS33A-203ENST00000536212 NIFKQ9BYG3 293 aaKnown RBP6.36□□□□□ -1.39
VPS33A-203ENST00000536212 EDEM3Q9BZQ6 932 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 TSPYL1Q9H0U9 437 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 QTRT2Q9H974 415 aaKnown RBP6.36□□□□□ -1.39
VPS33A-203ENST00000536212 AGPAT5Q9NUQ2 364 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 ZNHIT6Q9NWK9 470 aaKnown RBP6.36□□□□□ -1.39
VPS33A-203ENST00000536212 TFCP2L1Q9NZI6 479 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 GUCA1BQ9UMX6 200 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms