RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 GJB6O95452 261 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 AGTP01019 485 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 FESP07332 822 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 MMEP08473 750 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 CYP2D6P10635 497 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 GNAZP19086 355 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 GNAQP50148 359 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 FXR2P51116 673 aaKnown RBP eCLIP7.55□□□□□ -1.2
CPSF7-215ENST00000536145 RNASE9P60153 205 aaKnown RBP7.55□□□□□ -1.2
CPSF7-215ENST00000536145 PTENP60484 403 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 POLR2FP61218 127 aaKnown RBP7.55□□□□□ -1.2
CPSF7-215ENST00000536145 PPATQ06203 517 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 KLHL30Q0D2K2 578 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 CHRNA2Q15822 529 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 SV2BQ7L1I2 683 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 TBC1D1Q86TI0 1168 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-215ENST00000536145 DGKHQ86XP1 1220 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 DZIP3Q86Y13 1208 aaKnown RBP7.55□□□□□ -1.2
CPSF7-215ENST00000536145 ANKLE1Q8NAG6 615 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 PROCA1Q8NCQ7 364 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-215ENST00000536145 GLIS3Q8NEA6 775 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 CCDC26Q8TAB7 109 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 TBC1D16Q8TBP0 767 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 RAD54LQ92698 747 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 SH3GL3Q99963 347 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 AP1M1Q9BXS5 423 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 ZMYND12Q9H0C1 365 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 KIF9Q9HAQ2 790 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 IL17RBQ9NRM6 502 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 TCP11L1Q9NUJ3 509 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 GRHL1Q9NZI5 618 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 ADAM22Q9P0K1 906 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 SLAIN2Q9P270 581 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 BCCIPQ9P287 314 aaKnown RBP eCLIP7.55□□□□□ -1.2
CPSF7-215ENST00000536145 LRP2BPQ9P2M1 347 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 TRMT112Q9UI30 125 aaKnown RBP7.55□□□□□ -1.2
CPSF7-215ENST00000536145 MAD2L2Q9UI95 211 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 DIS3Q9Y2L1 958 aaKnown RBP7.55□□□□□ -1.2
CPSF7-215ENST00000536145 L3MBTL1Q9Y468 752 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 PCDHA3Q9Y5H8 950 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 PCDHA2Q9Y5H9 948 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 MAST2Q6P0Q8 1798 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 STRCQ7RTU9 1775 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 CCDC88AQ3V6T2 1871 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 ESYT2A0FGR8 921 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 IGF2BP3O00425 579 aaKnown RBP eCLIP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 KRIT1O00522 736 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 ABLIM1O14639 778 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 KIAA0391O15091 583 aaKnown RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 DIAPH2O60879 1101 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 SKAP2O75563 359 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 GFPT2O94808 682 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 SNUPNO95149 360 aaKnown RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 GNA14O95837 355 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 CYP19A1P11511 503 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 PMS2P54278 862 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 IFI35P80217 286 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 SARNPP82979 210 aaKnown RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 FKBP3Q00688 224 aaKnown RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 SEPT2Q15019 361 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 NONOQ15233 471 aaKnown RBP eCLIP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 FAM47AQ5JRC9 791 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 HYIQ5T013 277 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 CAPRIN2Q6IMN6 1127 aaKnown RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 MFSD5Q6N075 450 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 KCNK18Q7Z418 384 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 CROCCP2Q86T23 111 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 SPICE1Q8N0Z3 855 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 SLC30A5Q8TAD4 765 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 CERKQ8TCT0 537 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 TBC1D31Q96DN5 1066 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 SAAL1Q96ER3 474 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 SLC4A9Q96Q91 983 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 TSG101Q99816 390 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 ELAC2Q9BQ52 826 aaKnown RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 TRIM51Q9BSJ1 452 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 SYT11Q9BT88 431 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 CELF4Q9BZC1 486 aaKnown RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 RAB17Q9H0T7 212 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 PABPC3Q9H361 631 aaKnown RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 KCTD10Q9H3F6 313 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 AZI2Q9H6S1 392 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 ECT2Q9H8V3 914 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 SIX2Q9NPC8 291 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 DCP1AQ9NPI6 582 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 AMACRQ9UHK6 382 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 NAGPAQ9UK23 515 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 AJAP1Q9UKB5 411 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-215ENST00000536145 NR2E1Q9Y466 385 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 LRRC42Q9Y546 428 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 ROBO3Q96MS0 1386 aa7.54□□□□□ -1.2
CPSF7-215ENST00000536145 RPTORQ8N122 1335 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 CCDC169A6NNP5 214 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 A8MUI8 341 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 O00370 1275 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 DDX3XO00571 662 aaKnown RBP eCLIP7.53□□□□□ -1.22e-6■■■□□ 16.2
CPSF7-215ENST00000536145 TOM1O60784 492 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 ADAMTS2O95450 1211 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 KRT16P08779 473 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms