RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 PLA2G4DQ86XP0 818 aa13.86□□□□□ -0.19
CCND1-202ENST00000535993 FBXL16Q8N461 479 aa13.86□□□□□ -0.19
CCND1-202ENST00000535993 BANK1Q8NDB2 785 aa13.86□□□□□ -0.19
CCND1-202ENST00000535993 JAKMIP1Q96N16 626 aaKnown RBP13.86□□□□□ -0.19
CCND1-202ENST00000535993 C11orf84Q9BUA3 381 aaPredicted RBP13.86□□□□□ -0.19
CCND1-202ENST00000535993 ADGRA3Q8IWK6 1321 aa13.86□□□□□ -0.19
CCND1-202ENST00000535993 COL4A6Q14031 1691 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 IGKV6D-21A0A0A0MT36 114 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 SMIM35A0A1B0GVV1 85 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 C5orf67F2Z3F1 127 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 DDX39AO00148 427 aaKnown RBP13.85□□□□□ -0.19
CCND1-202ENST00000535993 NCK2O43639 380 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 HBP1O60381 514 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 CYP3A4P08684 503 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 PSMA5P28066 241 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 GNA11P29992 359 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 CD52P31358 61 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 BMPR1AP36894 532 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 SETQ01105 290 aaPredicted RBP13.85□□□□□ -0.19
CCND1-202ENST00000535993 APOBRQ0VD83 1088 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 PAK2Q13177 524 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 BTG3Q14201 252 aaPredicted RBP13.85□□□□□ -0.19
CCND1-202ENST00000535993 PUS10Q3MIT2 529 aaKnown RBP13.85□□□□□ -0.19
CCND1-202ENST00000535993 MIS18BP1Q6P0N0 1132 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 MTHFD1LQ6UB35 978 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 ABHD15Q6UXT9 468 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 REXO1Q8N1G1 1221 aaKnown RBP13.85□□□□□ -0.19
CCND1-202ENST00000535993 ATP8B4Q8TF62 1192 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 TRAPPC12Q8WVT3 735 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 BRF1Q92994 677 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 ZBTB10Q96DT7 871 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 CELF4Q9BZC1 486 aaKnown RBP13.85□□□□□ -0.19
CCND1-202ENST00000535993 ZMYND12Q9H0C1 365 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 NSUN3Q9H649 340 aaKnown RBP13.85□□□□□ -0.19
CCND1-202ENST00000535993 AGO3Q9H9G7 860 aaKnown RBP13.85□□□□□ -0.19
CCND1-202ENST00000535993 ZNF302Q9NR11 478 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 TCEAL9Q9UHQ7 104 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 SNX14Q9Y5W7 946 aa13.85□□□□□ -0.19
CCND1-202ENST00000535993 FAM86B1E9PN63 330 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 IPO5O00410 1097 aaKnown RBP13.84□□□□□ -0.19
CCND1-202ENST00000535993 PRPF3O43395 683 aaKnown RBP13.84□□□□□ -0.19
CCND1-202ENST00000535993 CCNE2O96020 404 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 FAM86B2P0C5J1 330 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 STAG3L1P0CL83 205 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 CPA1P15085 419 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 KRT76Q01546 638 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 TMEM62Q0P6H9 643 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 TCEAL5Q5H9L2 206 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 BICD2Q8TD16 824 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 CLP1Q92989 425 aaKnown RBP13.84□□□□□ -0.19
CCND1-202ENST00000535993 ZNF689Q96CS4 500 aaPredicted RBP13.84□□□□□ -0.19
CCND1-202ENST00000535993 ZNF577Q9BSK1 485 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 PLVAPQ9BX97 442 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 LMAN2LQ9H0V9 348 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 RC3H2Q9HBD1 1191 aaKnown RBP13.84□□□□□ -0.19
CCND1-202ENST00000535993 TBC1D22BQ9NU19 505 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 PADI3Q9ULW8 664 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 IGSF9BQ9UPX0 1349 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 KDM3AQ9Y4C1 1321 aa13.84□□□□□ -0.19
CCND1-202ENST00000535993 COL1A2P08123 1366 aa13.83□□□□□ -0.19
CCND1-202ENST00000535993 NID2Q14112 1375 aa13.83□□□□□ -0.19
CCND1-202ENST00000535993 MYO7AQ13402 2215 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 TTC3P53804 2025 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 DGKIO75912 1065 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 RPS6KB1P23443 525 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 KLRC1P26715 233 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 ZNF484Q5JVG2 852 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 ODR4Q5SWX8 454 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 PTCRAQ6ISU1 281 aaPredicted RBP13.83□□□□□ -0.2
CCND1-202ENST00000535993 ZNF746Q6NUN9 644 aaPredicted RBP13.83□□□□□ -0.2
CCND1-202ENST00000535993 SWSAP1Q6NVH7 229 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 PDXDC2PQ6P474 469 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 NPAS4Q8IUM7 802 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 CCDC148Q8NFR7 591 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.83□□□□□ -0.2
CCND1-202ENST00000535993 CRYGNQ8WXF5 182 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 PABPC5Q96DU9 382 aaKnown RBP13.83□□□□□ -0.2
CCND1-202ENST00000535993 RNF216Q9NWF9 866 aaPredicted RBP13.83□□□□□ -0.2
CCND1-202ENST00000535993 FAM50BQ9Y247 325 aa13.83□□□□□ -0.2
CCND1-202ENST00000535993 IGLV3-22A0A075B6J6 115 aa13.82□□□□□ -0.2
CCND1-202ENST00000535993 DHX15O43143 795 aaKnown RBP13.82□□□□□ -0.2
CCND1-202ENST00000535993 PKN1Q16512 942 aa13.82□□□□□ -0.2
CCND1-202ENST00000535993 NAALADL2Q58DX5 795 aa13.82□□□□□ -0.2
CCND1-202ENST00000535993 EP400NLQ6ZTU2 488 aa13.82□□□□□ -0.2
CCND1-202ENST00000535993 RTN4RL1Q86UN2 441 aaPredicted RBP13.82□□□□□ -0.2
CCND1-202ENST00000535993 CCDC60Q8IWA6 550 aaPredicted RBP13.82□□□□□ -0.2
CCND1-202ENST00000535993 CKAP2LQ8IYA6 745 aa13.82□□□□□ -0.2
CCND1-202ENST00000535993 SMAP1Q8IYB5 467 aaPredicted RBP13.82□□□□□ -0.2
CCND1-202ENST00000535993 CMTR2Q8IYT2 770 aaKnown RBP13.82□□□□□ -0.2
CCND1-202ENST00000535993 NEK9Q8TD19 979 aa13.82□□□□□ -0.2
CCND1-202ENST00000535993 LINC01599Q8WXQ3 324 aa13.82□□□□□ -0.2
CCND1-202ENST00000535993 BBXQ8WY36 941 aaPredicted RBP13.82□□□□□ -0.2
CCND1-202ENST00000535993 AGXT2Q9BYV1 514 aa13.82□□□□□ -0.2
CCND1-202ENST00000535993 LRFN2Q9ULH4 789 aa13.82□□□□□ -0.2
CCND1-202ENST00000535993 GINS2Q9Y248 185 aa13.82□□□□□ -0.2
CCND1-202ENST00000535993 GRXCR2A6NFK2 248 aa13.81□□□□□ -0.2
CCND1-202ENST00000535993 GRM6O15303 877 aa13.81□□□□□ -0.2
CCND1-202ENST00000535993 RPS6KA5O75582 802 aa13.81□□□□□ -0.2
CCND1-202ENST00000535993 PSAPP07602 524 aa13.81□□□□□ -0.2
CCND1-202ENST00000535993 LINC00271P0C7V0 271 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms