RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 MUTYHQ9UIF7 546 aa14.81□□□□□ -0.04
TNFRSF1A-207ENST00000535958 PADI3Q9ULW8 664 aa14.81□□□□□ -0.04
TNFRSF1A-207ENST00000535958 GINS2Q9Y248 185 aa14.81□□□□□ -0.04
TNFRSF1A-207ENST00000535958 TTC3P53804 2025 aa14.81□□□□□ -0.04
TNFRSF1A-207ENST00000535958 MYO7AQ13402 2215 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 SMIM35A0A1B0GVV1 85 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 POTEB3A0JP26 581 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 DENND3A2RUS2 1198 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 LINC01565O15544 149 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 LINC00271P0C7V0 271 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 GTF2F1P35269 517 aaKnown RBP eCLIP14.8□□□□□ -0.041e-6■■■■□ 22.9
TNFRSF1A-207ENST00000535958 SLC26A2P50443 739 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 STAT5BP51692 787 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 ACTR2P61160 394 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 KRT76Q01546 638 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 NFX1Q12986 1120 aaKnown RBP14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 PLCB4Q15147 1175 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 FAM160B1Q5W0V3 765 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 PPP1R18Q6NYC8 613 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 POTEBQ6S5H4 581 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 PLPPR4Q7Z2D5 763 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 NME8Q8N427 588 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 FANCBQ8NB91 859 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 KLHL23Q8NBE8 558 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 MICAL1Q8TDZ2 1067 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 POF1BQ8WVV4 589 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 LINC01599Q8WXQ3 324 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 ZBTB10Q96DT7 871 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 CELF4Q9BZC1 486 aaKnown RBP14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 RBM28Q9NW13 759 aaKnown RBP14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 PCDHB7Q9Y5E2 793 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 PCDHB12Q9Y5F1 795 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 PCDHA2Q9Y5H9 948 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 NFASCO94856 1347 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 IGSF9BQ9UPX0 1349 aa14.8□□□□□ -0.04
TNFRSF1A-207ENST00000535958 FSD2A1L4K1 749 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 RPS6KA5O75582 802 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 FOSP01100 380 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 ITGB1P05556 798 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 SRGAP2BP0DMP2 458 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 NRIP1P48552 1158 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 ADCY7P51828 1080 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 ADAM15Q13444 863 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 RNF20Q5VTR2 975 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 RBM23Q86U06 439 aaKnown RBP14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 RNF135Q8IUD6 432 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 TRAPPC12Q8WVT3 735 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 KIAA1671Q9BY89 1806 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 LRRC2Q9BYS8 371 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 ANO3Q9BYT9 981 aa14.79□□□□□ -0.04
TNFRSF1A-207ENST00000535958 hCG_1984214I3L0E3 225 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 DDX39AO00148 427 aaKnown RBP14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 SLC27A2O14975 620 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 PPFIA3O75145 1194 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 SARSP49591 514 aaKnown RBP14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 MRE11P49959 708 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 TMEM266Q2M3C6 531 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 CEP55Q53EZ4 464 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 HERC4Q5GLZ8 1057 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 WWC2Q6AWC2 1192 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 MTHFD1LQ6UB35 978 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 FAM43BQ6ZT52 329 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 HFE2Q6ZVN8 426 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 TEX2Q8IWB9 1127 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 EFHBQ8N7U6 833 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 ZNF713Q8N859 430 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 PGBD1Q96JS3 809 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 FBXL18Q96ME1 805 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 PCYT2Q99447 389 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 GLT8D2Q9H1C3 349 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 ANO2Q9NQ90 1003 aa14.78□□□□□ -0.04
TNFRSF1A-207ENST00000535958 PIEZO1Q92508 2521 aa14.77□□□□□ -0.04
TNFRSF1A-207ENST00000535958 KDM3AQ9Y4C1 1321 aa14.77□□□□□ -0.04
TNFRSF1A-207ENST00000535958 TBKBP1A7MCY6 615 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 HBP1O60381 514 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 NHLH1Q02575 133 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 UBE3AQ05086 875 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 AP3B2Q13367 1082 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 CREB3L3Q68CJ9 461 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 MIS18BP1Q6P0N0 1132 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 SUGP1Q8IWZ8 645 aaKnown RBP14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 CKAP2LQ8IYA6 745 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 THNSL1Q8IYQ7 743 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 SPPL3Q8TCT6 385 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 TLE6Q9H808 572 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 AGO4Q9HCK5 861 aaKnown RBP14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 RIC8AQ9NPQ8 531 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 C1orf112Q9NSG2 853 aa14.77□□□□□ -0.05
TNFRSF1A-207ENST00000535958 LOXHD1Q8IVV2 1947 aa14.76□□□□□ -0.05
TNFRSF1A-207ENST00000535958 COL1A2P08123 1366 aa14.76□□□□□ -0.05
TNFRSF1A-207ENST00000535958 CNTNAP5Q8WYK1 1306 aa14.76□□□□□ -0.05
TNFRSF1A-207ENST00000535958 GPR182O15218 404 aa14.76□□□□□ -0.05
TNFRSF1A-207ENST00000535958 ARP10275 920 aa14.76□□□□□ -0.05
TNFRSF1A-207ENST00000535958 DNAJB1P25685 340 aa14.76□□□□□ -0.05
TNFRSF1A-207ENST00000535958 GATMP50440 423 aa14.76□□□□□ -0.05
TNFRSF1A-207ENST00000535958 RTN1Q16799 776 aa14.76□□□□□ -0.05
TNFRSF1A-207ENST00000535958 PDXDC2PQ6P474 469 aa14.76□□□□□ -0.05
TNFRSF1A-207ENST00000535958 ADGRD2Q7Z7M1 963 aa14.76□□□□□ -0.05
TNFRSF1A-207ENST00000535958 RTN4RL1Q86UN2 441 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF1A-207ENST00000535958 SGMS1Q86VZ5 419 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms