RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 FMR1NBQ8N0W7 255 aaPredicted RBP16.31■□□□□ 0.2
MSRB3-206ENST00000535664 SYMPKQ92797 1274 aaKnown RBP16.31■□□□□ 0.2
MSRB3-206ENST00000535664 EPSTI1Q96J88 318 aa16.31■□□□□ 0.2
MSRB3-206ENST00000535664 GPR20Q99678 358 aa16.31■□□□□ 0.2
MSRB3-206ENST00000535664 TUT1Q9H6E5 874 aaKnown RBP16.31■□□□□ 0.2
MSRB3-206ENST00000535664 IL23AQ9NPF7 189 aa16.31■□□□□ 0.2
MSRB3-206ENST00000535664 KCNH7Q9NS40 1196 aa16.31■□□□□ 0.2
MSRB3-206ENST00000535664 SCN10AQ9Y5Y9 1956 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 A0A087X0B3 334 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 PP2D1A8MPX8 630 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 NR1I2O75469 434 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 PSMD10O75832 226 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 KCNA2P16389 499 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 CHMP4BP1P59074 171 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 FAM160A1Q05DH4 1040 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 SHHQ15465 462 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 B3GNT9Q6UX72 402 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 AFAP1L1Q8TED9 768 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 AK8Q96MA6 479 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 UIMC1Q96RL1 719 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 C16orf70Q9BSU1 422 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 MMTAG2Q9BU76 263 aaKnown RBP16.3■□□□□ 0.2
MSRB3-206ENST00000535664 PPP1R12CQ9BZL4 782 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 TTC12Q9H892 705 aaPredicted RBP16.3■□□□□ 0.2
MSRB3-206ENST00000535664 AGO4Q9HCK5 861 aaKnown RBP16.3■□□□□ 0.2
MSRB3-206ENST00000535664 TRMT13Q9NUP7 481 aaKnown RBP16.3■□□□□ 0.2
MSRB3-206ENST00000535664 LTBP2Q14767 1821 aa16.3■□□□□ 0.2
MSRB3-206ENST00000535664 POTEMA6NI47 508 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 DHX15O43143 795 aaKnown RBP16.29■□□□□ 0.2
MSRB3-206ENST00000535664 LGALS2P05162 132 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 RPLP2P05387 115 aaKnown RBP16.29■□□□□ 0.2
MSRB3-206ENST00000535664 CYP2C18P33260 490 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 TECP42680 631 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 SMAD3P84022 425 aaKnown RBP16.29■□□□□ 0.2
MSRB3-206ENST00000535664 PTK7Q13308 1070 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 ITGB3BPQ13352 177 aaPredicted RBP16.29■□□□□ 0.2
MSRB3-206ENST00000535664 PDIA5Q14554 519 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 TMEM266Q2M3C6 531 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 CCDC73Q6ZRK6 1079 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 RNPC3Q96LT9 517 aaKnown RBP16.29■□□□□ 0.2
MSRB3-206ENST00000535664 RIT2Q99578 217 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 ZNF577Q9BSK1 485 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 CCSER1Q9C0I3 900 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 SMARCAD1Q9H4L7 1026 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 JPH1Q9HDC5 661 aaPredicted RBP16.29■□□□□ 0.2
MSRB3-206ENST00000535664 DACT1Q9NYF0 836 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 TMEM63CQ9P1W3 806 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 HDAC6Q9UBN7 1215 aa16.29■□□□□ 0.2
MSRB3-206ENST00000535664 IPO5O00410 1097 aaKnown RBP16.28■□□□□ 0.2
MSRB3-206ENST00000535664 ATP9AO75110 1047 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 FGBP02675 491 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 ZNF286BP0CG31 522 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 ACTN1P12814 892 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 CSF2RAP15509 400 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 SLC26A2P50443 739 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 RBL2Q08999 1139 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 FAM109BQ6ICB4 259 aaPredicted RBP16.28■□□□□ 0.2
MSRB3-206ENST00000535664 AZI2Q9H6S1 392 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 TBC1D22BQ9NU19 505 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 FAM13BQ9NYF5 915 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 ERAP1Q9NZ08 941 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 SLC9A2Q9UBY0 812 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 LRWD1Q9UFC0 647 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 TCEAL9Q9UHQ7 104 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 KCNH3Q9ULD8 1083 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 PCDHA12Q9UN75 941 aa16.28■□□□□ 0.2
MSRB3-206ENST00000535664 NRCAMQ92823 1304 aa16.27■□□□□ 0.2
MSRB3-206ENST00000535664 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.27■□□□□ 0.2
MSRB3-206ENST00000535664 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.27■□□□□ 0.2
MSRB3-206ENST00000535664 C17orf102A2RUQ5 167 aa16.27■□□□□ 0.2
MSRB3-206ENST00000535664 CAND2O75155 1236 aa16.27■□□□□ 0.2
MSRB3-206ENST00000535664 CYP2C9P11712 490 aa16.27■□□□□ 0.2
MSRB3-206ENST00000535664 CDC25AP30304 524 aa16.27■□□□□ 0.2
MSRB3-206ENST00000535664 TCF7P36402 384 aaPredicted RBP16.27■□□□□ 0.2
MSRB3-206ENST00000535664 PPP2R5CQ13362 524 aa16.27■□□□□ 0.2
MSRB3-206ENST00000535664 E2F4Q16254 413 aa16.27■□□□□ 0.2
MSRB3-206ENST00000535664 LRCH2Q5VUJ6 765 aa16.27■□□□□ 0.2
MSRB3-206ENST00000535664 GDF6Q6KF10 455 aaPredicted RBP16.27■□□□□ 0.2
MSRB3-206ENST00000535664 DDX19AQ9NUU7 478 aaKnown RBP16.27■□□□□ 0.2
MSRB3-206ENST00000535664 MARCH6O60337 910 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 IQCF3P0C7M6 154 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 SELPP16109 830 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 SYKP43405 635 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 CCL23P55773 120 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 TMEM240Q5SV17 173 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 C9orf50Q5SZB4 431 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 CAVIN1Q6NZI2 390 aaKnown RBP16.26■□□□□ 0.19
MSRB3-206ENST00000535664 CABP7Q86V35 215 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 HERVK_113Q902F9 699 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 GLG1Q92896 1179 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.26■□□□□ 0.19
MSRB3-206ENST00000535664 TEKT3Q9BXF9 490 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 RAB34Q9BZG1 259 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 UNC45AQ9H3U1 944 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 CLSTN2Q9H4D0 955 aa16.26■□□□□ 0.19
MSRB3-206ENST00000535664 EMSYQ7Z589 1322 aa16.25■□□□□ 0.19
MSRB3-206ENST00000535664 TRIOBPQ9H2D6 2365 aa16.25■□□□□ 0.19
MSRB3-206ENST00000535664 TMEM265A0A087WTH1 108 aa16.25■□□□□ 0.19
MSRB3-206ENST00000535664 EML1O00423 815 aa16.25■□□□□ 0.19
MSRB3-206ENST00000535664 ACTN4O43707 911 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms