RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 MCTP2Q6DN12 878 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 OCRLQ01968 901 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 SKIV2LQ15477 1246 aaKnown RBP13.6□□□□□ -0.23
SPG11-203ENST00000535302 DNAJC24Q6P3W2 148 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 RNF168Q8IYW5 571 aaPredicted RBP13.6□□□□□ -0.23
SPG11-203ENST00000535302 SLC44A5Q8NCS7 719 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 NACC1Q96RE7 527 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 NFX1Q12986 1120 aaKnown RBP13.6□□□□□ -0.23
SPG11-203ENST00000535302 PTPREP23469 700 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 MSH2P43246 934 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 DCAF4L1Q3SXM0 396 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 ARHGEF18Q6ZSZ5 1173 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 PCGF5Q86SE9 256 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 MAP7D3Q8IWC1 876 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 MSTO1Q9BUK6 570 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 TDRD3Q9H7E2 651 aaKnown RBP13.6□□□□□ -0.23
SPG11-203ENST00000535302 EPS15L1Q9UBC2 864 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 TRIM49BA6NDI0 452 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 LINC00301Q8NCQ3 95 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 N4BP2L2Q92802 583 aaPredicted RBP13.59□□□□□ -0.23
SPG11-203ENST00000535302 PI4KBQ9UBF8 816 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 STAP2Q9UGK3 403 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 ZNF335Q9H4Z2 1342 aaPredicted RBP13.59□□□□□ -0.23
SPG11-203ENST00000535302 SUPT20HL1Q3ZLR7 823 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 RNF135Q8IUD6 432 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 hCG_2014768A0A024R1R8 64 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 LRRD1A4D1F6 860 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 POTEMA6NI47 508 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 MRFAP1L1Q96HT8 127 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 MYL1P05976 194 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 PSAPP07602 524 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 SOX11P35716 441 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 RPAINQ86UA6 219 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 SNX19Q92543 992 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 GSDMAQ96QA5 445 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 ZBED2Q9BTP6 218 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 ARID5BQ14865 1188 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 BHMT2Q9H2M3 363 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 ADD3Q9UEY8 706 aaKnown RBP13.59□□□□□ -0.23
SPG11-203ENST00000535302 ZBTB7AO95365 584 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 GAP43P17677 238 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 PRDX5P30044 214 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 GRAPQ13588 217 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 EPHA10Q5JZY3 1008 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 KDELC2Q7Z4H8 507 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 WDR17Q8IZU2 1322 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 GRAPLQ8TC17 118 aaPredicted RBP13.59□□□□□ -0.23
SPG11-203ENST00000535302 ZFYVE19Q96K21 471 aa13.59□□□□□ -0.23
SPG11-203ENST00000535302 IGSF1Q8N6C5 1336 aa13.58□□□□□ -0.23
SPG11-203ENST00000535302 GTPBP10A4D1E9 387 aaKnown RBP13.58□□□□□ -0.23
SPG11-203ENST00000535302 ATP1A3P13637 1013 aa13.58□□□□□ -0.23
SPG11-203ENST00000535302 SYCP2LQ5T4T6 812 aa13.58□□□□□ -0.23
SPG11-203ENST00000535302 CIAPIN1Q6FI81 312 aa13.58□□□□□ -0.23
SPG11-203ENST00000535302 TBC1D10CQ8IV04 446 aa13.58□□□□□ -0.23
SPG11-203ENST00000535302 SIX6OS1Q8N1H7 587 aa13.58□□□□□ -0.23
SPG11-203ENST00000535302 AGR3Q8TD06 166 aa13.58□□□□□ -0.23
SPG11-203ENST00000535302 MLXIPLQ9NP71 852 aa13.58□□□□□ -0.23
SPG11-203ENST00000535302 GINM1Q9NU53 330 aa13.58□□□□□ -0.23
SPG11-203ENST00000535302 GDAQ9Y2T3 454 aa13.58□□□□□ -0.23
SPG11-203ENST00000535302 PCDHA13Q9Y5I0 950 aa13.58□□□□□ -0.23
SPG11-203ENST00000535302 MAN2A1Q16706 1144 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 SLC27A3Q5K4L6 730 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 OR6B3Q8NGW1 331 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 SLC10A4Q96EP9 437 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 LBHD1Q9BQE6 289 aaPredicted RBP13.58□□□□□ -0.24
SPG11-203ENST00000535302 POLR3CQ9BUI4 534 aaPredicted RBP13.58□□□□□ -0.24
SPG11-203ENST00000535302 YIPF2Q9BWQ6 316 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 LRRC4Q9HBW1 653 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 BBOX1O75936 387 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 PMS1P54277 932 aaKnown RBP13.58□□□□□ -0.24
SPG11-203ENST00000535302 DSTYKQ6XUX3 929 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 CYB5R4Q7L1T6 521 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 SIRT2Q8IXJ6 389 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 DHTKD1Q96HY7 919 aaPredicted RBP13.58□□□□□ -0.24
SPG11-203ENST00000535302 PARVGQ9HBI0 331 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 FAN1Q9Y2M0 1017 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 PIK3R2O00459 728 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 MCF2LO15068 1137 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 CACNB2Q08289 660 aaPredicted RBP13.58□□□□□ -0.24
SPG11-203ENST00000535302 ANKRD20A4Q4UJ75 823 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 ANKRD20A8PQ5CZ79 823 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 ZC3H12BQ5HYM0 836 aaKnown RBP13.58□□□□□ -0.24
SPG11-203ENST00000535302 ANKRD20A2Q5SQ80 823 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 ANKRD20A1Q5TYW2 823 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 RNF207Q6ZRF8 634 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 TEX2Q8IWB9 1127 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 CACTINQ8WUQ7 758 aaKnown RBP13.58□□□□□ -0.24
SPG11-203ENST00000535302 TLK1Q9UKI8 766 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 PALLDQ8WX93 1383 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 PEG3Q9GZU2 1588 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 USP17L15C9J2P7 530 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 USP17L13C9JLJ4 530 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 USP17L11C9JVI0 530 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 USP17L18D6R9N7 530 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 USP17L22D6RA61 530 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 USP17L17D6RBQ6 530 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 USP17L19D6RCP7 530 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 USP17L20D6RJB6 530 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 GYS2P54840 703 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms