RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 B3GNT9Q6UX72 402 aa20.24■□□□□ 0.83
CAPRIN1-217ENST00000534825 HERC6Q8IVU3 1022 aa20.24■□□□□ 0.83
CAPRIN1-217ENST00000534825 ETNPPLQ8TBG4 499 aa20.24■□□□□ 0.83
CAPRIN1-217ENST00000534825 TNFRSF25Q93038 417 aa20.24■□□□□ 0.83
CAPRIN1-217ENST00000534825 PCDHA2Q9Y5H9 948 aa20.24■□□□□ 0.83
CAPRIN1-217ENST00000534825 CHD9Q3L8U1 2897 aa20.23■□□□□ 0.83
CAPRIN1-217ENST00000534825 CCDC194A0A1B0GVG4 234 aa20.23■□□□□ 0.83
CAPRIN1-217ENST00000534825 DEFB103AP81534 67 aa20.23■□□□□ 0.83
CAPRIN1-217ENST00000534825 MYO9BQ13459 2157 aa20.23■□□□□ 0.83
CAPRIN1-217ENST00000534825 MTHFD1LQ6UB35 978 aa20.23■□□□□ 0.83
CAPRIN1-217ENST00000534825 PIK3AP1Q6ZUJ8 805 aa20.23■□□□□ 0.83
CAPRIN1-217ENST00000534825 MYLIPQ8WY64 445 aa20.23■□□□□ 0.83
CAPRIN1-217ENST00000534825 UNC45AQ9H3U1 944 aa20.23■□□□□ 0.83
CAPRIN1-217ENST00000534825 DISC1Q9NRI5 854 aa20.23■□□□□ 0.83
CAPRIN1-217ENST00000534825 GABBR1Q9UBS5 961 aa20.23■□□□□ 0.83
CAPRIN1-217ENST00000534825 WDR64B1ANS9 1081 aa20.22■□□□□ 0.83
CAPRIN1-217ENST00000534825 SLC37A4O43826 429 aa20.22■□□□□ 0.83
CAPRIN1-217ENST00000534825 GAS7O60861 476 aa20.22■□□□□ 0.83
CAPRIN1-217ENST00000534825 KLRC1P26715 233 aa20.22■□□□□ 0.83
CAPRIN1-217ENST00000534825 NR5A1Q13285 461 aa20.22■□□□□ 0.83
CAPRIN1-217ENST00000534825 LETM2Q2VYF4 491 aa20.22■□□□□ 0.83
CAPRIN1-217ENST00000534825 LRCH2Q5VUJ6 765 aa20.22■□□□□ 0.83
CAPRIN1-217ENST00000534825 PPP4R3AQ6IN85 833 aa20.22■□□□□ 0.83
CAPRIN1-217ENST00000534825 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.22■□□□□ 0.837e-13■■■■□ 26.5
CAPRIN1-217ENST00000534825 TMCO2Q7Z6W1 182 aaPredicted RBP20.22■□□□□ 0.83
CAPRIN1-217ENST00000534825 NEK8Q86SG6 692 aa20.22■□□□□ 0.83
CAPRIN1-217ENST00000534825 SLC28A3Q9HAS3 691 aa20.22■□□□□ 0.83
CAPRIN1-217ENST00000534825 DDX25Q9UHL0 483 aaKnown RBP20.22■□□□□ 0.83
CAPRIN1-217ENST00000534825 SMIM35A0A1B0GVV1 85 aa20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 FAM205CA6NFA0 338 aa20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 ZNF862O60290 1169 aa20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 EFCAB14O75071 495 aa20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 KCNJ6P48051 423 aa20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 ZNF484Q5JVG2 852 aa20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 RSPH3Q86UC2 560 aa20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 CCDC83Q8IWF9 413 aa20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 BBXQ8WY36 941 aaPredicted RBP20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 SEPT8Q92599 483 aa20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 ZSCAN31Q96LW9 406 aaPredicted RBP20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 TEKT3Q9BXF9 490 aa20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 FAM49AQ9H0Q0 323 aaPredicted RBP20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 KCNMB3Q9NPA1 279 aa20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 SAMM50Q9Y512 469 aa20.21■□□□□ 0.83
CAPRIN1-217ENST00000534825 BTBD18B2RXH4 712 aa20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 MMP1P03956 469 aa20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 RPLP2P05387 115 aaKnown RBP20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 SFNP31947 248 aa20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 KRT2P35908 639 aa20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 MRPS6P82932 125 aaKnown RBP20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 LPIN1Q14693 890 aa20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 KRT40Q6A162 431 aa20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 KIAA0319LQ8IZA0 1049 aa20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 NME8Q8N427 588 aa20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 LLPHQ9BRT6 129 aaKnown RBP20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 CDY2AQ9Y6F7 541 aa20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 IGSF9BQ9UPX0 1349 aa20.2■□□□□ 0.82
CAPRIN1-217ENST00000534825 KIF28PB7ZC32 967 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 ARHGEF15O94989 841 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 GJB5O95377 273 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 CA3P07451 260 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 GHRP10912 638 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 JAK3P52333 1124 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 RABEP1Q15276 862 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 UGCGQ16739 394 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 FBXO47Q5MNV8 452 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 TRMT1LQ7Z2T5 733 aaKnown RBP20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 CKAP2LQ8IYA6 745 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 IL27Q8NEV9 243 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 RDM1Q8NG50 284 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 HAS1Q92839 578 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 PRDM12Q9H4Q4 367 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 TCEAL9Q9UHQ7 104 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 COL1A2P08123 1366 aa20.19■□□□□ 0.82
CAPRIN1-217ENST00000534825 CHD7Q9P2D1 2997 aa20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 CHMP2AO43633 222 aa20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 CCNT1O60563 726 aaKnown RBP20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 STBD1O95210 358 aa20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 GCFC2P16383 781 aaKnown RBP20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 IER5Q5VY09 327 aa20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 PPP2R2DQ66LE6 453 aa20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 APBB2Q92870 758 aa20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 FAM20AQ96MK3 541 aa20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 IFIH1Q9BYX4 1025 aaKnown RBP20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 AGO3Q9H9G7 860 aaKnown RBP20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 SH2B1Q9NRF2 756 aaPredicted RBP20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 SQORQ9Y6N5 450 aa20.18■□□□□ 0.82
CAPRIN1-217ENST00000534825 TLL1O43897 1013 aa20.17■□□□□ 0.82
CAPRIN1-217ENST00000534825 C22orf31O95567 290 aa20.17■□□□□ 0.82
CAPRIN1-217ENST00000534825 FOSBP53539 338 aa20.17■□□□□ 0.82
CAPRIN1-217ENST00000534825 TAP1Q03518 808 aa20.17■□□□□ 0.82
CAPRIN1-217ENST00000534825 TMEM62Q0P6H9 643 aa20.17■□□□□ 0.82
CAPRIN1-217ENST00000534825 ADGRE1Q14246 886 aa20.17■□□□□ 0.82
CAPRIN1-217ENST00000534825 MIER3Q7Z3K6 550 aa20.17■□□□□ 0.82
CAPRIN1-217ENST00000534825 DIS3L2Q8IYB7 885 aaKnown RBP20.17■□□□□ 0.82
CAPRIN1-217ENST00000534825 RAD9AQ99638 391 aa20.17■□□□□ 0.82
CAPRIN1-217ENST00000534825 CELF4Q9BZC1 486 aaKnown RBP20.17■□□□□ 0.82
CAPRIN1-217ENST00000534825 UPF2Q9HAU5 1272 aaKnown RBP20.17■□□□□ 0.82
CAPRIN1-217ENST00000534825 BRMS1Q9HCU9 246 aa20.17■□□□□ 0.82
CAPRIN1-217ENST00000534825 NRBP2Q9NSY0 501 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms