RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 CCDC194A0A1B0GVG4 234 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 ZBTB39O15060 712 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 TXKP42681 527 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 SCNN1BP51168 640 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 ACCSLQ4AC99 568 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 RSRC2Q7L4I2 434 aaKnown RBP9.9□□□□□ -0.82
SF3B2-216ENST00000534765 CCDC125Q86Z20 511 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 TSGA10Q9BZW7 698 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 USH1CQ9Y6N9 552 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 TRIM49BA6NDI0 452 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 EIF3HO15372 352 aaKnown RBP eCLIP9.9□□□□□ -0.821e-7■□□□□ 10.9
SF3B2-216ENST00000534765 GRB10Q13322 594 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 WHAMMP3Q1A5X7 153 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 CYB5D1Q6P9G0 228 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 BLOC1S4Q9NUP1 217 aa9.9□□□□□ -0.82
SF3B2-216ENST00000534765 DIAPH2O60879 1101 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 SRGAP2O75044 1071 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 RPS6KA5O75582 802 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 PECAM1P16284 738 aaPredicted RBP9.89□□□□□ -0.83
SF3B2-216ENST00000534765 XBP1P17861 261 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 MCM3P25205 808 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 TBC1D1Q86TI0 1168 aaPredicted RBP9.89□□□□□ -0.83
SF3B2-216ENST00000534765 CCDC17Q96LX7 622 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.89□□□□□ -0.83
SF3B2-216ENST00000534765 L3MBTL1Q9Y468 752 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 PLCG1P19174 1290 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 GNAQP50148 359 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 SOGA3Q5TF21 947 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 ARHGAP27Q6ZUM4 889 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 KIFC2Q96AC6 838 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 GMCL1Q96IK5 515 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 ZNF341Q9BYN7 854 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 MRPL44Q9H9J2 332 aaKnown RBP9.89□□□□□ -0.83
SF3B2-216ENST00000534765 PRDM16Q9HAZ2 1276 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 EMILIN3Q9NT22 766 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 SEC63Q9UGP8 760 aaKnown RBP9.89□□□□□ -0.83
SF3B2-216ENST00000534765 RIPK3Q9Y572 518 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 BMP3P12645 472 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 ADCY7P51828 1080 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 SPIRE1Q08AE8 756 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 NEK8Q86SG6 692 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 IL31RAQ8NI17 732 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 JDP2Q8WYK2 163 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 SLF1Q9BQI6 1058 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 UBXN6Q9BZV1 441 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 IKZF4Q9H2S9 585 aa9.89□□□□□ -0.83
SF3B2-216ENST00000534765 NPHP3-ACAD11A0A0J9YXS1 232 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 RNF225M0QZC1 329 aaPredicted RBP9.88□□□□□ -0.83
SF3B2-216ENST00000534765 POTEIP0CG38 1075 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 POTEJP0CG39 1038 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 FCER1AP12319 257 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 SMARCA1P28370 1054 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 PSMC6P62333 389 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 MYL5Q02045 173 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 NONOQ15233 471 aaKnown RBP eCLIP9.88□□□□□ -0.83
SF3B2-216ENST00000534765 CFAP58Q5T655 872 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 SYT17Q9BSW7 474 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 WDR18Q9BV38 432 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 PSTPIP2Q9H939 334 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 DISC1Q9NRI5 854 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 NFIBO00712 420 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 PFDN1O60925 122 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 HLTFQ14527 1009 aaKnown RBP eCLIP9.88□□□□□ -0.83
SF3B2-216ENST00000534765 SYDE2Q5VT97 1194 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 LZTS2Q9BRK4 669 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 SELENOOQ9BVL4 669 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 RHBDL2Q9NX52 303 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 WRAP73Q9P2S5 460 aaPredicted RBP9.88□□□□□ -0.83
SF3B2-216ENST00000534765 RPS6KL1Q9Y6S9 549 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 ESYT2A0FGR8 921 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 ADM5C9JUS6 153 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 HMGB2P26583 209 aaKnown RBP9.88□□□□□ -0.83
SF3B2-216ENST00000534765 CALML3P27482 149 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 CCDC178Q5BJE1 867 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 FAM83AQ86UY5 434 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 HERC5Q9UII4 1024 aaKnown RBP9.88□□□□□ -0.83
SF3B2-216ENST00000534765 LRRD1A4D1F6 860 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 GUCY2FP51841 1108 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 APBA1Q02410 837 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 CACNB1Q02641 598 aaPredicted RBP9.88□□□□□ -0.83
SF3B2-216ENST00000534765 MTMR2Q13614 643 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 BTNL9Q6UXG8 535 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 DCAF4Q8WV16 495 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 CCDC113Q9H0I3 377 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 GGA3Q9NZ52 723 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 HPCAL4Q9UM19 191 aa9.88□□□□□ -0.83
SF3B2-216ENST00000534765 A0A0U1RQJ8 604 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 TEX33O43247 280 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 SLC7A5Q01650 507 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 GPATCH4Q5T3I0 446 aaKnown RBP9.87□□□□□ -0.83
SF3B2-216ENST00000534765 IRF2BP1Q8IU81 584 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 TRIM58Q8NG06 486 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 EZH1Q92800 747 aaPredicted RBP9.87□□□□□ -0.83
SF3B2-216ENST00000534765 C6orf50Q9HD87 102 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 PAPOLBQ9NRJ5 636 aaKnown RBP9.87□□□□□ -0.83
SF3B2-216ENST00000534765 GPRC5DQ9NZD1 345 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 HDAC6Q9UBN7 1215 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 LTBP3Q9NS15 1303 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 EML1O00423 815 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 OR52Z1P0C646 297 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms