RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 FBXO22Q8NEZ5 403 aa21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 CCDC148Q8NFR7 591 aa21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 TM6SF1Q9BZW5 370 aa21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 SH3GLB2Q9NR46 395 aa21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 MTUS1Q9ULD2 1270 aa21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 KDM3AQ9Y4C1 1321 aa21.4■■□□□ 1.02
NDUFS3-213ENST00000534716 ENPP3O14638 875 aa21.4■■□□□ 1.02
NDUFS3-213ENST00000534716 TOB2Q14106 344 aaPredicted RBP21.4■■□□□ 1.02
NDUFS3-213ENST00000534716 EPC2Q52LR7 807 aa21.4■■□□□ 1.02
NDUFS3-213ENST00000534716 FAM160B1Q5W0V3 765 aa21.4■■□□□ 1.02
NDUFS3-213ENST00000534716 IL27Q8NEV9 243 aa21.4■■□□□ 1.02
NDUFS3-213ENST00000534716 ATP8B4Q8TF62 1192 aa21.4■■□□□ 1.02
NDUFS3-213ENST00000534716 HLA-CQ95604 372 aa21.4■■□□□ 1.02
NDUFS3-213ENST00000534716 HBP1O60381 514 aa21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 UPP2O95045 317 aa21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 ZNF746Q6NUN9 644 aaPredicted RBP21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 MTHFD1LQ6UB35 978 aa21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 CCDC60Q8IWA6 550 aaPredicted RBP21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 ZBTB10Q96DT7 871 aa21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 IL17RAQ96F46 866 aa21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 ZNF274Q96GC6 653 aaPredicted RBP21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 UHRF1Q96T88 793 aaPredicted RBP21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 ZNF577Q9BSK1 485 aa21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 SLC26A6Q9BXS9 759 aa21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 FAM49AQ9H0Q0 323 aaPredicted RBP21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 RC3H2Q9HBD1 1191 aaKnown RBP21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 TRPV2Q9Y5S1 764 aa21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 CYP46A1Q9Y6A2 500 aa21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 SIP14410 1827 aa21.39■■□□□ 1.01
NDUFS3-213ENST00000534716 COL1A2P08123 1366 aa21.38■■□□□ 1.01
NDUFS3-213ENST00000534716 IGSF9BQ9UPX0 1349 aa21.38■■□□□ 1.01
NDUFS3-213ENST00000534716 MIS18BP1Q6P0N0 1132 aa21.38■■□□□ 1.01
NDUFS3-213ENST00000534716 SMAP1Q8IYB5 467 aaPredicted RBP21.38■■□□□ 1.01
NDUFS3-213ENST00000534716 TRAPPC12Q8WVT3 735 aa21.38■■□□□ 1.01
NDUFS3-213ENST00000534716 LENG9Q96B70 501 aa21.38■■□□□ 1.01
NDUFS3-213ENST00000534716 FTHL17Q9BXU8 183 aa21.38■■□□□ 1.01
NDUFS3-213ENST00000534716 AGO3Q9H9G7 860 aaKnown RBP21.38■■□□□ 1.01
NDUFS3-213ENST00000534716 NCOA5Q9HCD5 579 aaKnown RBP21.38■■□□□ 1.01
NDUFS3-213ENST00000534716 ZNF302Q9NR11 478 aa21.38■■□□□ 1.01
NDUFS3-213ENST00000534716 MAFBQ9Y5Q3 323 aaPredicted RBP21.38■■□□□ 1.01
NDUFS3-213ENST00000534716 H3BNC9 293 aa21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 M0QZ92 97 aa21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 DDX39AO00148 427 aaKnown RBP21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 BACH1O14867 736 aa21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 CD52P31358 61 aa21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 USP11P51784 963 aa21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 CCT2P78371 535 aaKnown RBP21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 ZNF484Q5JVG2 852 aa21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 PDXDC2PQ6P474 469 aa21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 TMEM192Q8IY95 271 aa21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 FAM177A1Q8N128 213 aaPredicted RBP21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 CRIPAKQ8N1N5 446 aa21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 ZNF689Q96CS4 500 aaPredicted RBP21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 MRPL38Q96DV4 380 aaKnown RBP21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 CELF4Q9BZC1 486 aaKnown RBP21.37■■□□□ 1.01
NDUFS3-213ENST00000534716 ZBTB42B2RXF5 422 aa21.36■■□□□ 1.01
NDUFS3-213ENST00000534716 EDIL3O43854 480 aa21.36■■□□□ 1.01
NDUFS3-213ENST00000534716 LINC00271P0C7V0 271 aa21.36■■□□□ 1.01
NDUFS3-213ENST00000534716 ATP4AP20648 1035 aa21.36■■□□□ 1.01
NDUFS3-213ENST00000534716 KLRC1P26715 233 aa21.36■■□□□ 1.01
NDUFS3-213ENST00000534716 KRT76Q01546 638 aa21.36■■□□□ 1.01
NDUFS3-213ENST00000534716 PRR16Q569H4 304 aa21.36■■□□□ 1.01
NDUFS3-213ENST00000534716 SWSAP1Q6NVH7 229 aa21.36■■□□□ 1.01
NDUFS3-213ENST00000534716 VPS54Q9P1Q0 977 aa21.36■■□□□ 1.01
NDUFS3-213ENST00000534716 KAT6AQ92794 2004 aa21.36■■□□□ 1.01
NDUFS3-213ENST00000534716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 C5orf67F2Z3F1 127 aa21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 KCNQ1P51787 676 aa21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 PTPROQ16827 1216 aa21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 TRIM22Q8IYM9 498 aa21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 KIAA0319LQ8IZA0 1049 aa21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 FIBCD1Q8N539 461 aa21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 RASGRP4Q8TDF6 673 aa21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 LINC01599Q8WXQ3 324 aa21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 BBXQ8WY36 941 aaPredicted RBP21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 CLP1Q92989 425 aaKnown RBP21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 PADI3Q9ULW8 664 aa21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 RWDD3Q9Y3V2 267 aa21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 PCDHA10Q9Y5I2 948 aa21.35■■□□□ 1.01
NDUFS3-213ENST00000534716 ADGRA3Q8IWK6 1321 aa21.34■■□□□ 1.01
NDUFS3-213ENST00000534716 RB1P06400 928 aa21.34■■□□□ 1.01
NDUFS3-213ENST00000534716 PSAPP07602 524 aa21.34■■□□□ 1.01
NDUFS3-213ENST00000534716 SSRP1Q08945 709 aaKnown RBP21.34■■□□□ 1.01
NDUFS3-213ENST00000534716 RTN4RL1Q86UN2 441 aaPredicted RBP21.34■■□□□ 1.01
NDUFS3-213ENST00000534716 C22orf23Q9BZE7 217 aa21.34■■□□□ 1.01
NDUFS3-213ENST00000534716 PPFIA3O75145 1194 aa21.33■■□□□ 1.01
NDUFS3-213ENST00000534716 DGKIO75912 1065 aa21.33■■□□□ 1.01
NDUFS3-213ENST00000534716 DEXIO95424 95 aa21.33■■□□□ 1.01
NDUFS3-213ENST00000534716 NEFLP07196 543 aa21.33■■□□□ 1.01
NDUFS3-213ENST00000534716 BMPR1AP36894 532 aa21.33■■□□□ 1.01
NDUFS3-213ENST00000534716 TMEM62Q0P6H9 643 aa21.33■■□□□ 1.01
NDUFS3-213ENST00000534716 GPM6BQ13491 265 aa21.33■■□□□ 1.01
NDUFS3-213ENST00000534716 RIT2Q99578 217 aa21.33■■□□□ 1.01
NDUFS3-213ENST00000534716 TCEAL9Q9UHQ7 104 aa21.33■■□□□ 1.01
NDUFS3-213ENST00000534716 PCDHA4Q9UN74 947 aa21.33■■□□□ 1.01
NDUFS3-213ENST00000534716 WDR64B1ANS9 1081 aa21.32■■□□□ 1
NDUFS3-213ENST00000534716 M0R2N6 131 aa21.32■■□□□ 1
NDUFS3-213ENST00000534716 MSH4O15457 936 aa21.32■■□□□ 1
NDUFS3-213ENST00000534716 C22orf31O95567 290 aa21.32■■□□□ 1
NDUFS3-213ENST00000534716 NLRP5P59047 1200 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms