RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 FBXL16Q8N461 479 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 PLVAPQ9BX97 442 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 AGXT2Q9BYV1 514 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 TM6SF1Q9BZW5 370 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 FAM49AQ9H0Q0 323 aaPredicted RBP14.31□□□□□ -0.12
USF1-211ENST00000534633 AGO3Q9H9G7 860 aaKnown RBP14.31□□□□□ -0.12
USF1-211ENST00000534633 CLDND1Q9NY35 253 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 PRKAG3Q9UGI9 489 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 TRPC6Q9Y210 931 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 PCDHA2Q9Y5H9 948 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 C5orf42Q9H799 3197 aa14.31□□□□□ -0.12
USF1-211ENST00000534633 FAM86C2PA6NEL3 165 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 hCG_1984214I3L0E3 225 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 GRM6O15303 877 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 ALADP13716 330 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 CD52P31358 61 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 SLC26A2P50443 739 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 STAT5BP51692 787 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 ACTR2P61160 394 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 PLCB4Q15147 1175 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 CTC1Q2NKJ3 1217 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 CEP55Q53EZ4 464 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 BLOC1S2Q6QNY1 142 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 EP400NLQ6ZTU2 488 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 Q6ZUG5 572 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 RUFY3Q7L099 469 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 CRIPAKQ8N1N5 446 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 ZNF713Q8N859 430 aaPredicted RBP14.3□□□□□ -0.12
USF1-211ENST00000534633 CYP2W1Q8TAV3 490 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 LINC01599Q8WXQ3 324 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 TRPV2Q9Y5S1 764 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 IGSF9BQ9UPX0 1349 aa14.3□□□□□ -0.12
USF1-211ENST00000534633 SMIM35A0A1B0GVV1 85 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 PRR33A8MZF0 331 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 ATG7O95352 703 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 MMP1P03956 469 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 PSMA5P28066 241 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 LTBRP36941 435 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 ADCY7P51828 1080 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 ANAPC15P60006 121 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 FUT2Q10981 343 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 AP3B2Q13367 1082 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 TOB2Q14106 344 aaPredicted RBP14.29□□□□□ -0.12
USF1-211ENST00000534633 RTN1Q16799 776 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 NAALADL2Q58DX5 795 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 TYW1BQ6NUM6 668 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 FAM43BQ6ZT52 329 aaPredicted RBP14.29□□□□□ -0.12
USF1-211ENST00000534633 NPAS4Q8IUM7 802 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 CMTR2Q8IYT2 770 aaKnown RBP14.29□□□□□ -0.12
USF1-211ENST00000534633 NME8Q8N427 588 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 P2RX5Q93086 422 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 ZBTB10Q96DT7 871 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 KIF2CQ99661 725 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 ANO3Q9BYT9 981 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 UPF3BQ9BZI7 483 aaKnown RBP14.29□□□□□ -0.12
USF1-211ENST00000534633 GLT8D2Q9H1C3 349 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 AGO4Q9HCK5 861 aaKnown RBP14.29□□□□□ -0.12
USF1-211ENST00000534633 KDM3AQ9Y4C1 1321 aa14.29□□□□□ -0.12
USF1-211ENST00000534633 IGKV6D-21A0A0A0MT36 114 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 POTEB3A0JP26 581 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 STXBP3O00186 592 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 MEIS1O00470 390 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 ZBTB43O43298 467 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 STAG3L1P0CL83 205 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 ARP10275 920 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 SREBF1P36956 1147 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 ZP2Q05996 745 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 TMEM62Q0P6H9 643 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 HYAL1Q12794 435 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 PAK2Q13177 524 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 ITGB3BPQ13352 177 aaPredicted RBP14.28□□□□□ -0.12
USF1-211ENST00000534633 POTEBQ6S5H4 581 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 NIPA1Q7RTP0 329 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 RTN4RL1Q86UN2 441 aaPredicted RBP14.28□□□□□ -0.12
USF1-211ENST00000534633 TRAPPC12Q8WVT3 735 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 PGBD1Q96JS3 809 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 CELF4Q9BZC1 486 aaKnown RBP14.28□□□□□ -0.12
USF1-211ENST00000534633 FAM217BQ9NTX9 383 aaPredicted RBP14.28□□□□□ -0.12
USF1-211ENST00000534633 BARHL2Q9NY43 387 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 PADI3Q9ULW8 664 aa14.28□□□□□ -0.12
USF1-211ENST00000534633 MRPL42Q9Y6G3 142 aaKnown RBP14.28□□□□□ -0.12
USF1-211ENST00000534633 COL1A2P08123 1366 aa14.27□□□□□ -0.12
USF1-211ENST00000534633 SMCO2A6NFE2 343 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 DCXO43602 365 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 SCG2P13521 617 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 HOXD11P31277 338 aaPredicted RBP14.27□□□□□ -0.13
USF1-211ENST00000534633 CLK2P49760 499 aaKnown RBP14.27□□□□□ -0.13
USF1-211ENST00000534633 RCAN1P53805 252 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 EVCP57679 992 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 KRT76Q01546 638 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 APOBRQ0VD83 1088 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 MTHFD1LQ6UB35 978 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 ADHFE1Q8IWW8 467 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 BRF1Q92994 677 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 ALG13Q9NP73 1137 aaKnown RBP14.27□□□□□ -0.13
USF1-211ENST00000534633 PLAGL2Q9UPG8 496 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 CYP46A1Q9Y6A2 500 aa14.27□□□□□ -0.13
USF1-211ENST00000534633 V9GY48 417 aaPredicted RBP14.27□□□□□ -0.13
USF1-211ENST00000534633 MUC6Q6W4X9 2439 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms