RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 CCDC148Q8NFR7 591 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 CAGE1Q8TC20 777 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 TMEM40Q8WWA1 233 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 DNAJB3Q8WWF6 145 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 CDHR1Q96JP9 859 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 CDX2Q99626 313 aaPredicted RBP5.75□□□□□ -1.49
USH1C-210ENST00000534556 SH2D3AQ9BRG2 576 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 ZNF577Q9BSK1 485 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 KATNAL1Q9BW62 490 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 GLT8D2Q9H1C3 349 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 SMARCAD1Q9H4L7 1026 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 EHMT1Q9H9B1 1298 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 KCNMB3Q9NPA1 279 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 VAV3Q9UKW4 847 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 NOD1Q9Y239 953 aa5.75□□□□□ -1.49
USH1C-210ENST00000534556 MAFBQ9Y5Q3 323 aaPredicted RBP5.75□□□□□ -1.49
USH1C-210ENST00000534556 PDCD11Q14690 1871 aaKnown RBP5.75□□□□□ -1.49
USH1C-210ENST00000534556 NRCAMQ92823 1304 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 IGSF9BQ9UPX0 1349 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 TTC28Q96AY4 2481 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 DOCK6Q96HP0 2047 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 POTEB3A0JP26 581 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 ZBBXA8MT70 800 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 RSPH10B2B2RC85 870 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 ZBTB39O15060 712 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 MGEA5O60502 916 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 C22orf31O95567 290 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 MMP1P03956 469 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 LINC00271P0C7V0 271 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 RSPH10BP0C881 870 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 KLRC1P26715 233 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 RFC2P35250 354 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 DRP2Q13474 957 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 TARBP2Q15633 366 aaKnown RBP5.74□□□□□ -1.49
USH1C-210ENST00000534556 ZNF746Q6NUN9 644 aaPredicted RBP5.74□□□□□ -1.49
USH1C-210ENST00000534556 CNKSR3Q6P9H4 555 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 POTEBQ6S5H4 581 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 MTHFD1LQ6UB35 978 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 PIK3AP1Q6ZUJ8 805 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 PLPPR4Q7Z2D5 763 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 RPAINQ86UA6 219 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 POTEDQ86YR6 584 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 HERC6Q8IVU3 1022 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 RPUSD2Q8IZ73 545 aaKnown RBP5.74□□□□□ -1.49
USH1C-210ENST00000534556 KIAA0319LQ8IZA0 1049 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 CRIPAKQ8N1N5 446 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 RETREG2Q8NC44 543 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 BICD2Q8TD16 824 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 CCDC12Q8WUD4 166 aaPredicted RBP5.74□□□□□ -1.49
USH1C-210ENST00000534556 GLG1Q92896 1179 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 TIFAQ96CG3 184 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 TBC1D32Q96NH3 1257 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 SDF4Q9BRK5 362 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 FTOQ9C0B1 505 aaKnown RBP eCLIP5.74□□□□□ -1.49
USH1C-210ENST00000534556 TMEM60Q9H2L4 133 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 TMX1Q9H3N1 280 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 PRDM12Q9H4Q4 367 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 ZNF576Q9H609 170 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 CERS4Q9HA82 394 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 PRDM6Q9NQX0 595 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 ERAP1Q9NZ08 941 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 GABBR1Q9UBS5 961 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 TUBE1Q9UJT0 475 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 LIMCH1Q9UPQ0 1083 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 STXBP5LQ9Y2K9 1186 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 CDY2AQ9Y6F7 541 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 SLC4A7Q9Y6M7 1214 aa5.74□□□□□ -1.49
USH1C-210ENST00000534556 A0A087WWV3 80 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 CHMP2AO43633 222 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 LPXNO60711 386 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 VTNP04004 478 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 CA3P07451 260 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 GHRP10912 638 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 ATP2A2P16615 1042 aaKnown RBP5.73□□□□□ -1.49
USH1C-210ENST00000534556 CD52P31358 61 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 GATMP50440 423 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 TOB1P50616 345 aaPredicted RBP5.73□□□□□ -1.49
USH1C-210ENST00000534556 MRPS6P82932 125 aaKnown RBP5.73□□□□□ -1.49
USH1C-210ENST00000534556 TAP1Q03518 808 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 NBR1Q14596 966 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 NONOQ15233 471 aaKnown RBP eCLIP5.73□□□□□ -1.49
USH1C-210ENST00000534556 ANKRD1Q15327 319 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 TMEM266Q2M3C6 531 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 LETM2Q2VYF4 491 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 FBXO47Q5MNV8 452 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 ZNF697Q5TEC3 545 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 LRCH2Q5VUJ6 765 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 MCTP2Q6DN12 878 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 FAM117BQ6P1L5 589 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 PDXDC2PQ6P474 469 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 MOXD1Q6UVY6 613 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 KRT25Q7Z3Z0 450 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 DIS3L2Q8IYB7 885 aaKnown RBP5.73□□□□□ -1.49
USH1C-210ENST00000534556 C4orf32Q8N8J7 132 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 BANK1Q8NDB2 785 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 ATP8B4Q8TF62 1192 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 ZNF668Q96K58 619 aaPredicted RBP5.73□□□□□ -1.49
USH1C-210ENST00000534556 PPP1R16BQ96T49 567 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 BACH2Q9BYV9 841 aa5.73□□□□□ -1.49
USH1C-210ENST00000534556 FAM49AQ9H0Q0 323 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms