RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 REXO1L1PQ8IX06 675 aa14.79□□□□□ -0.04
BEST1-208ENST00000534553 C4orf19Q8IY42 314 aa14.79□□□□□ -0.04
BEST1-208ENST00000534553 SMAP1Q8IYB5 467 aaPredicted RBP14.79□□□□□ -0.04
BEST1-208ENST00000534553 SLC17A8Q8NDX2 589 aa14.79□□□□□ -0.04
BEST1-208ENST00000534553 GLIS3Q8NEA6 775 aa14.79□□□□□ -0.04
BEST1-208ENST00000534553 GOLGA5Q8TBA6 731 aa14.79□□□□□ -0.04
BEST1-208ENST00000534553 WNK4Q96J92 1243 aa14.79□□□□□ -0.04
BEST1-208ENST00000534553 PCMTD1Q96MG8 357 aaPredicted RBP14.79□□□□□ -0.04
BEST1-208ENST00000534553 NUCKS1Q9H1E3 243 aaKnown RBP14.79□□□□□ -0.04
BEST1-208ENST00000534553 METTL14Q9HCE5 456 aaKnown RBP14.79□□□□□ -0.04
BEST1-208ENST00000534553 CYP39A1Q9NYL5 469 aa14.79□□□□□ -0.04
BEST1-208ENST00000534553 TBC1D7Q9P0N9 293 aa14.79□□□□□ -0.04
BEST1-208ENST00000534553 PFASO15067 1338 aa14.79□□□□□ -0.04
BEST1-208ENST00000534553 WDR90Q96KV7 1748 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 NFASCO94856 1347 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 SLC16A3O15427 465 aaKnown RBP14.78□□□□□ -0.04
BEST1-208ENST00000534553 COPB2P35606 906 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 CDK17Q00537 523 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 FRMD5Q7Z6J6 570 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 CCDC43Q96MW1 224 aaKnown RBP14.78□□□□□ -0.04
BEST1-208ENST00000534553 SAMM50Q9Y512 469 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 A0A0G2JLL6 359 aaPredicted RBP14.78□□□□□ -0.04
BEST1-208ENST00000534553 TESPA1A2RU30 521 aaPredicted RBP14.78□□□□□ -0.04
BEST1-208ENST00000534553 IQCA1LA6NCM1 817 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 SOWAHDA6NJG2 315 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 ADM5C9JUS6 153 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 GCNT3O95395 438 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 YBX3P16989 372 aaKnown RBP eCLIP14.78□□□□□ -0.04
BEST1-208ENST00000534553 NR2F2P24468 414 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 PSMC5P62195 406 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 MEA1Q16626 185 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 PRRT2Q7Z6L0 340 aaPredicted RBP14.78□□□□□ -0.04
BEST1-208ENST00000534553 TRIM59Q8IWR1 403 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 NELFCDQ8IXH7 590 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 MYCT1Q8N699 235 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 ZNF592Q92610 1267 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 A1CFQ9NQ94 594 aaKnown RBP14.78□□□□□ -0.04
BEST1-208ENST00000534553 LARSQ9P2J5 1176 aaKnown RBP14.78□□□□□ -0.04
BEST1-208ENST00000534553 FZD1Q9UP38 647 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 PCDHB13Q9Y5F0 798 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 ADGRG1Q9Y653 693 aa14.78□□□□□ -0.04
BEST1-208ENST00000534553 LOC285556D6RIA3 1793 aa14.77□□□□□ -0.04
BEST1-208ENST00000534553 SPDYE5A6NIY4 337 aa14.77□□□□□ -0.05
BEST1-208ENST00000534553 UNCXA6NJT0 531 aa14.77□□□□□ -0.05
BEST1-208ENST00000534553 EPHX2P34913 555 aa14.77□□□□□ -0.05
BEST1-208ENST00000534553 PRKG1Q13976 671 aa14.77□□□□□ -0.05
BEST1-208ENST00000534553 TOGARAM2Q6ZUX3 1019 aa14.77□□□□□ -0.05
BEST1-208ENST00000534553 RIOX2Q8IUF8 465 aa14.77□□□□□ -0.05
BEST1-208ENST00000534553 FAM178BQ8IXR5 827 aa14.77□□□□□ -0.05
BEST1-208ENST00000534553 CCDC170Q8IYT3 715 aa14.77□□□□□ -0.05
BEST1-208ENST00000534553 FGFBP2Q9BYJ0 223 aa14.77□□□□□ -0.05
BEST1-208ENST00000534553 ANKEF1Q9NU02 776 aa14.77□□□□□ -0.05
BEST1-208ENST00000534553 SIK3Q9Y2K2 1263 aa14.77□□□□□ -0.05
BEST1-208ENST00000534553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.77□□□□□ -0.05
BEST1-208ENST00000534553 A0A0G2JMZ2 1700 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 DDX39AO00148 427 aaKnown RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 RIOK3O14730 519 aaKnown RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 HNRNPH3P31942 346 aaKnown RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 PPIL2Q13356 520 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 MYBPC2Q14324 1141 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 PLS1Q14651 629 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 PADI6Q6TGC4 694 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 RAD9BQ6WBX8 426 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 HS2ST1Q7LGA3 356 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 BANK1Q8NDB2 785 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 CDCA5Q96FF9 252 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 EEF2KMTQ96G04 330 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 CGNQ9P2M7 1197 aaKnown RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 WRAP73Q9P2S5 460 aaPredicted RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 PCDHA10Q9Y5I2 948 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 COL11A1P12107 1806 aaPredicted RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 RSPH10B2B2RC85 870 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 IPO7O95373 1038 aaKnown RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 RSPH10BP0C881 870 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 EPB41P11171 864 aaKnown RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 YWHABP31946 246 aaKnown RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 CYLC1P35663 651 aaPredicted RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 RARRES1P49788 294 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 CASP5P51878 434 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 KRT83P78385 493 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 IRX3P78415 501 aaPredicted RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 ZNF720Q7Z2F6 126 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 ARMC9Q7Z3E5 817 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 PNMA8AQ86V59 439 aaPredicted RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 NEK11Q8NG66 645 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 ATP6V0A1Q93050 837 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 DRC1Q96MC2 740 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 MPHOSPH6Q99547 160 aaKnown RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 MKNK1Q9BUB5 465 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 MOV10L1Q9BXT6 1211 aaKnown RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 MYO1AQ9UBC5 1043 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 ARMCX3Q9UH62 379 aaPredicted RBP14.76□□□□□ -0.05
BEST1-208ENST00000534553 KCNH4Q9UQ05 1017 aa14.76□□□□□ -0.05
BEST1-208ENST00000534553 IRF6O14896 467 aa14.75□□□□□ -0.05
BEST1-208ENST00000534553 CTIFO43310 598 aaKnown RBP14.75□□□□□ -0.05
BEST1-208ENST00000534553 MYBP10242 640 aa14.75□□□□□ -0.05
BEST1-208ENST00000534553 SNRPFP62306 86 aaKnown RBP14.75□□□□□ -0.05
BEST1-208ENST00000534553 ERVK-24P63145 666 aa14.75□□□□□ -0.05
BEST1-208ENST00000534553 STXBP2Q15833 593 aa14.75□□□□□ -0.05
BEST1-208ENST00000534553 ODR4Q5SWX8 454 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms