RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 DUSP10Q9Y6W6 482 aa5.81□□□□□ -1.48
ATPAF1-211ENST00000534216 RASSF10A6NK89 507 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 CBX4O00257 560 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 FOXP2O15409 715 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 PRICKLE3O43900 615 aaPredicted RBP5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 SDHAP31040 664 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 RANGAP1P46060 587 aaPredicted RBP5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 TMEM132BQ14DG7 1078 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 CATSPEREQ5SY80 951 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 GIMAP6Q6P9H5 292 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 FAM124AQ86V42 546 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 LRRTM3Q86VH5 581 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 DHX37Q8IY37 1157 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 NIM1KQ8IY84 436 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 NUDT10Q8NFP7 164 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 ASB15Q8WXK1 588 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 MBD6Q96DN6 1003 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 NUDT11Q96G61 164 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 GBP4Q96PP9 640 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 GALNT8Q9NY28 637 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 PLAAQ9Y263 795 aa5.8□□□□□ -1.48
ATPAF1-211ENST00000534216 TLDC2A0PJX2 215 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 PTPDC1A2A3K4 754 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 FAM83GA6ND36 823 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 H0Y858 1186 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 KRT37O76014 449 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 MPIG6BO95866 241 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 POU3F2P20265 443 aaPredicted RBP5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 CNR2P34972 360 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 DALRD3Q5D0E6 543 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 CC2D1AQ6P1N0 951 aaPredicted RBP5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 DPP8Q6V1X1 898 aaPredicted RBP5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 FERMT3Q86UX7 667 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 LGI4Q8N135 537 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 KLHL36Q8N4N3 616 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 RELTQ969Z4 430 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 ORAI3Q9BRQ5 295 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 UCKL1Q9NWZ5 548 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 B4GALT6Q9UBX8 382 aa5.79□□□□□ -1.48
ATPAF1-211ENST00000534216 DVL2O14641 736 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 B4GALT3O60512 393 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 IL13RA1P78552 427 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 NFATC3Q12968 1075 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 PLEKHG4Q58EX7 1191 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 UBXN11Q5T124 520 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 BORAQ6PGQ7 559 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 Q6ZUG5 572 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 CXorf38Q8TB03 319 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 MFSD3Q96ES6 412 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 AMNQ9BXJ7 453 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 MTFR1LQ9H019 292 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 BARX1Q9HBU1 254 aaPredicted RBP5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 ASB1Q9Y576 335 aa5.78□□□□□ -1.48
ATPAF1-211ENST00000534216 PRAMEF22A3QJZ6 481 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 GOLGA6L22H0YM25 854 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 FOXD2O60548 495 aaPredicted RBP5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 KPNA6O60684 536 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 NEK4P51957 841 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 KIF11P52732 1056 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 STILQ15468 1287 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 CNNM4Q6P4Q7 775 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 LRSAM1Q6UWE0 723 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 KIF18BQ86Y91 864 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 HIPK4Q8NE63 616 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 AJUBAQ96IF1 538 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 BTBD2Q9BX70 525 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 ADAM29Q9UKF5 820 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 INVSQ9Y283 1065 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 TMA7Q9Y2S6 64 aaKnown RBP5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 ZDHHC9Q9Y397 364 aa5.77□□□□□ -1.49
ATPAF1-211ENST00000534216 KRTAP9-7A8MTY7 169 aa5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 H7C1D1 291 aa5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 POLD1P28340 1107 aa5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 ECE1P42892 770 aa5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 FNTBP49356 437 aa5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 WDR72Q3MJ13 1102 aa5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 CREB3L3Q68CJ9 461 aa5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 CXXC5Q7LFL8 322 aaKnown RBP5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 KBTBD2Q8IY47 623 aa5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 FOXRED1Q96CU9 486 aaPredicted RBP5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 TARS2Q9BW92 718 aaKnown RBP5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 KATNBL1Q9H079 304 aa5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 PCIF1Q9H4Z3 704 aa5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 ACSS2Q9NR19 701 aa5.76□□□□□ -1.49
ATPAF1-211ENST00000534216 IGSF3O75054 1194 aa5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 F2P00734 622 aa5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 SYN1P17600 705 aa5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 TOP3AQ13472 1001 aaPredicted RBP5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 PCBP1Q15365 356 aaKnown RBP eCLIP5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 ZNF174Q15697 407 aa5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 KANK2Q63ZY3 851 aa5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 SDE2Q6IQ49 451 aa5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 RTN4RL1Q86UN2 441 aaPredicted RBP5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 REXO1L1PQ8IX06 675 aa5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 PPM1KQ8N3J5 372 aa5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 KIAA1958Q8N8K9 716 aa5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 ERCC4Q92889 916 aaPredicted RBP5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 OR10A5Q9H207 317 aa5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 ZKSCAN5Q9Y2L8 839 aa5.75□□□□□ -1.49
ATPAF1-211ENST00000534216 ZNF891A8MT65 544 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms