RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 FAM217BQ9NTX9 383 aaPredicted RBP20.62■□□□□ 0.89
UBXN1-216ENST00000533908 TRPC6Q9Y210 931 aa20.62■□□□□ 0.89
UBXN1-216ENST00000533908 TRPV2Q9Y5S1 764 aa20.62■□□□□ 0.89
UBXN1-216ENST00000533908 SQORQ9Y6N5 450 aa20.62■□□□□ 0.89
UBXN1-216ENST00000533908 IGKV6D-21A0A0A0MT36 114 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 PRR33A8MZF0 331 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 STXBP3O00186 592 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 MEIS1O00470 390 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 ADAMTS3O15072 1205 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 NAPAP54920 295 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 CEP55Q53EZ4 464 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 RASEFQ8IZ41 740 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 SPPL3Q8TCT6 385 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 IGFLR1Q9H665 355 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 CDHR5Q9HBB8 845 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 RWDD3Q9Y3V2 267 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 LOXHD1Q8IVV2 1947 aa20.61■□□□□ 0.89
UBXN1-216ENST00000533908 IGSF9BQ9UPX0 1349 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 NCK2O43639 380 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 TBX10O75333 385 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 MMP1P03956 469 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 ITGB1P05556 798 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 ALADP13716 330 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 TMEM266Q2M3C6 531 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 ADCK5Q3MIX3 580 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 MTHFD1LQ6UB35 978 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 ADHFE1Q8IWW8 467 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 NEK1Q96PY6 1258 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 SDF4Q9BRK5 362 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 PLVAPQ9BX97 442 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 ANO3Q9BYT9 981 aa20.6■□□□□ 0.89
UBXN1-216ENST00000533908 SMIM35A0A1B0GVV1 85 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 SMCO2A6NFE2 343 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 MBTPS2O43462 519 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 FOSP01100 380 aaPredicted RBP20.59■□□□□ 0.89
UBXN1-216ENST00000533908 KLRC1P26715 233 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 CDC27P30260 824 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 IRS1P35568 1242 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 CLK2P49760 499 aaKnown RBP20.59■□□□□ 0.89
UBXN1-216ENST00000533908 ADAM15Q13444 863 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 SMAD2Q15796 467 aaKnown RBP20.59■□□□□ 0.89
UBXN1-216ENST00000533908 PAN2Q504Q3 1202 aaKnown RBP20.59■□□□□ 0.89
UBXN1-216ENST00000533908 ABHD15Q6UXT9 468 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 SYNE3Q6ZMZ3 975 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 ADGRD2Q7Z7M1 963 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 NPAS4Q8IUM7 802 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 CMTR2Q8IYT2 770 aaKnown RBP20.59■□□□□ 0.89
UBXN1-216ENST00000533908 P2RX5Q93086 422 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 UIMC1Q96RL1 719 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 FTHL17Q9BXU8 183 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 RBM28Q9NW13 759 aaKnown RBP20.59■□□□□ 0.89
UBXN1-216ENST00000533908 PRKAG3Q9UGI9 489 aa20.59■□□□□ 0.89
UBXN1-216ENST00000533908 KDM3AQ9Y4C1 1321 aa20.58■□□□□ 0.89
UBXN1-216ENST00000533908 DDX39AO00148 427 aaKnown RBP20.58■□□□□ 0.89
UBXN1-216ENST00000533908 DHX15O43143 795 aaKnown RBP20.58■□□□□ 0.89
UBXN1-216ENST00000533908 DCXO43602 365 aa20.58■□□□□ 0.89
UBXN1-216ENST00000533908 MGEA5O60502 916 aa20.58■□□□□ 0.89
UBXN1-216ENST00000533908 RPLP2P05387 115 aaKnown RBP20.58■□□□□ 0.89
UBXN1-216ENST00000533908 ATP4AP20648 1035 aa20.58■□□□□ 0.89
UBXN1-216ENST00000533908 SREBF1P36956 1147 aa20.58■□□□□ 0.89
UBXN1-216ENST00000533908 ADCY7P51828 1080 aa20.58■□□□□ 0.89
UBXN1-216ENST00000533908 KRT76Q01546 638 aa20.58■□□□□ 0.89
UBXN1-216ENST00000533908 RTN1Q16799 776 aa20.58■□□□□ 0.89
UBXN1-216ENST00000533908 DHX32Q7L7V1 743 aaKnown RBP20.58■□□□□ 0.89
UBXN1-216ENST00000533908 KIAA0319LQ8IZA0 1049 aa20.58■□□□□ 0.89
UBXN1-216ENST00000533908 KLHL23Q8NBE8 558 aa20.58■□□□□ 0.89
UBXN1-216ENST00000533908 KIAA1671Q9BY89 1806 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 FAM86B1E9PN63 330 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 ZBTB43O43298 467 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 FAM86B2P0C5J1 330 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 SCG2P13521 617 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 PAK2Q13177 524 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 PPP1R18Q6NYC8 613 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 NME8Q8N427 588 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 TMEM40Q8WWA1 233 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 CRYGNQ8WXF5 182 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 ERVK-5Q9HDB9 667 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 BARHL2Q9NY43 387 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 FAM50BQ9Y247 325 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 NOC2LQ9Y3T9 749 aaKnown RBP20.57■□□□□ 0.88
UBXN1-216ENST00000533908 PCDHGC5Q9Y5F6 944 aa20.57■□□□□ 0.88
UBXN1-216ENST00000533908 C5orf42Q9H799 3197 aa20.56■□□□□ 0.88
UBXN1-216ENST00000533908 IGLV3-22A0A075B6J6 115 aa20.56■□□□□ 0.88
UBXN1-216ENST00000533908 ZBTB42B2RXF5 422 aa20.56■□□□□ 0.88
UBXN1-216ENST00000533908 M0QZ92 97 aa20.56■□□□□ 0.88
UBXN1-216ENST00000533908 NFX1Q12986 1120 aaKnown RBP20.56■□□□□ 0.88
UBXN1-216ENST00000533908 TSGA10IPQ3SY00 556 aa20.56■□□□□ 0.88
UBXN1-216ENST00000533908 JAKMIP3Q5VZ66 844 aa20.56■□□□□ 0.88
UBXN1-216ENST00000533908 CCDC60Q8IWA6 550 aaPredicted RBP20.56■□□□□ 0.88
UBXN1-216ENST00000533908 TNPO1Q92973 898 aaKnown RBP20.56■□□□□ 0.88
UBXN1-216ENST00000533908 MSLNLQ96KJ4 702 aa20.56■□□□□ 0.88
UBXN1-216ENST00000533908 CLEC1BQ9P126 229 aa20.56■□□□□ 0.88
UBXN1-216ENST00000533908 MUC6Q6W4X9 2439 aa20.56■□□□□ 0.88
UBXN1-216ENST00000533908 STAG3L1P0CL83 205 aa20.55■□□□□ 0.88
UBXN1-216ENST00000533908 IBSPP21815 317 aaPredicted RBP20.55■□□□□ 0.88
UBXN1-216ENST00000533908 ADD1P35611 737 aaKnown RBP20.55■□□□□ 0.88
UBXN1-216ENST00000533908 SLC26A2P50443 739 aa20.55■□□□□ 0.88
UBXN1-216ENST00000533908 NAALADL2Q58DX5 795 aa20.55■□□□□ 0.88
UBXN1-216ENST00000533908 SWSAP1Q6NVH7 229 aa20.55■□□□□ 0.88
UBXN1-216ENST00000533908 NIPA1Q7RTP0 329 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms