RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ARMCX3Q9UH62 379 aaPredicted RBP21.14■□□□□ 0.97
CAPN1-226ENST00000533820 AJAP1Q9UKB5 411 aaPredicted RBP21.14■□□□□ 0.97
CAPN1-226ENST00000533820 PCDHB13Q9Y5F0 798 aa21.14■□□□□ 0.97
CAPN1-226ENST00000533820 PCDHGC5Q9Y5F6 944 aa21.14■□□□□ 0.97
CAPN1-226ENST00000533820 ZBTB5O15062 677 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 CDC37Q16543 378 aaPredicted RBP21.13■□□□□ 0.97
CAPN1-226ENST00000533820 GLE1Q53GS7 698 aaKnown RBP21.13■□□□□ 0.97
CAPN1-226ENST00000533820 CEP63Q96MT8 703 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 NT5C3AQ9H0P0 336 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 PPANQ9NQ55 473 aaKnown RBP21.13■□□□□ 0.97
CAPN1-226ENST00000533820 ITGA4P13612 1032 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 UCHL3P15374 230 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 INPP5BP32019 993 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 DOK7Q18PE1 504 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 QRICH1Q2TAL8 776 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 ALKBH5Q6P6C2 394 aaKnown RBP21.13■□□□□ 0.97
CAPN1-226ENST00000533820 TBC1D16Q8TBP0 767 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 PLCD4Q9BRC7 762 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 NUCKS1Q9H1E3 243 aaKnown RBP21.13■□□□□ 0.97
CAPN1-226ENST00000533820 MYH7BA7E2Y1 1941 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 LSP1P33241 339 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 TNNC1P63316 161 aa21.13■□□□□ 0.97
CAPN1-226ENST00000533820 IKQ13123 557 aaPredicted RBP21.13■□□□□ 0.97
CAPN1-226ENST00000533820 RC3H1Q5TC82 1133 aaKnown RBP21.13■□□□□ 0.97
CAPN1-226ENST00000533820 COL5A3P25940 1745 aaPredicted RBP21.12■□□□□ 0.97
CAPN1-226ENST00000533820 SF3A3Q12874 501 aaKnown RBP eCLIP21.12■□□□□ 0.978e-10■■■■□ 21.2
CAPN1-226ENST00000533820 EXOC3L4Q17RC7 722 aa21.12■□□□□ 0.97
CAPN1-226ENST00000533820 CATSPER3Q86XQ3 398 aa21.12■□□□□ 0.97
CAPN1-226ENST00000533820 ZFPM1Q8IX07 1006 aa21.12■□□□□ 0.97
CAPN1-226ENST00000533820 RBM46Q8TBY0 533 aaKnown RBP21.12■□□□□ 0.97
CAPN1-226ENST00000533820 EPB41P11171 864 aaKnown RBP21.12■□□□□ 0.97
CAPN1-226ENST00000533820 NT5C2P49902 561 aa21.12■□□□□ 0.97
CAPN1-226ENST00000533820 NFIAQ12857 509 aa21.12■□□□□ 0.97
CAPN1-226ENST00000533820 RNF187Q5TA31 235 aaPredicted RBP21.12■□□□□ 0.97
CAPN1-226ENST00000533820 IRF2BP2Q7Z5L9 587 aa21.12■□□□□ 0.97
CAPN1-226ENST00000533820 MIEF2Q96C03 454 aa21.12■□□□□ 0.97
CAPN1-226ENST00000533820 REEP2Q9BRK0 252 aa21.12■□□□□ 0.97
CAPN1-226ENST00000533820 DHX36Q9H2U1 1008 aaKnown RBP21.12■□□□□ 0.97
CAPN1-226ENST00000533820 AMACRQ9UHK6 382 aa21.12■□□□□ 0.97
CAPN1-226ENST00000533820 BCS1LQ9Y276 419 aa21.12■□□□□ 0.97
CAPN1-226ENST00000533820 WNK3Q9BYP7 1800 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 KIF4AO95239 1232 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 IL1R1P14778 569 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 PDE6BP35913 854 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 FLT3P36888 993 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 CLK2P49760 499 aaKnown RBP21.11■□□□□ 0.97
CAPN1-226ENST00000533820 KSR1Q8IVT5 923 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 ANO3Q9BYT9 981 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 hCG_1984214I3L0E3 225 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 AKAP3O75969 853 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 SNHG28P0DPA3 235 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 ATP2B4P23634 1241 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 SLF2Q8IX21 1173 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 ZNF713Q8N859 430 aaPredicted RBP21.11■□□□□ 0.97
CAPN1-226ENST00000533820 U2AF1L4Q8WU68 220 aaKnown RBP21.11■□□□□ 0.97
CAPN1-226ENST00000533820 UBLCP1Q8WVY7 318 aaPredicted RBP21.11■□□□□ 0.97
CAPN1-226ENST00000533820 SYN2Q92777 582 aaPredicted RBP21.11■□□□□ 0.97
CAPN1-226ENST00000533820 FAXDC2Q96IV6 333 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 P2RX7Q99572 595 aaKnown RBP21.11■□□□□ 0.97
CAPN1-226ENST00000533820 CELF4Q9BZC1 486 aaKnown RBP21.11■□□□□ 0.97
CAPN1-226ENST00000533820 NEUROG2Q9H2A3 272 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 DPH5Q9H2P9 285 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 AIPL1Q9NZN9 384 aa21.11■□□□□ 0.97
CAPN1-226ENST00000533820 GNA14O95837 355 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 SHMT1P34896 483 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 GABPAQ06546 454 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 PRPF4BQ13523 1007 aaKnown RBP21.1■□□□□ 0.97
CAPN1-226ENST00000533820 CYP2W1Q8TAV3 490 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 N4BP2L2Q92802 583 aaPredicted RBP21.1■□□□□ 0.97
CAPN1-226ENST00000533820 NAGPAQ9UK23 515 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 CAPN7Q9Y6W3 813 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 KDM3AQ9Y4C1 1321 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 FRMD3A2A2Y4 597 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 E7EVH7 732 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 SART1O43290 800 aaKnown RBP21.1■□□□□ 0.97
CAPN1-226ENST00000533820 GFPT2O94808 682 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 XRCC5P13010 732 aaKnown RBP21.1■□□□□ 0.97
CAPN1-226ENST00000533820 PON1P27169 355 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 COPB2P35606 906 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 METTL13Q8N6R0 699 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 RNF14Q9UBS8 474 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 PCDHAC2Q9Y5I4 1007 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.1■□□□□ 0.97
CAPN1-226ENST00000533820 KRIT1O00522 736 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 ABCB4P21439 1286 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 HOXA13P31271 388 aaPredicted RBP21.1■□□□□ 0.97
CAPN1-226ENST00000533820 SKOR1P84550 965 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 ODF2Q5BJF6 829 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 PEX26Q7Z412 305 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 CERS5Q8N5B7 392 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 BHMT2Q9H2M3 363 aa21.1■□□□□ 0.97
CAPN1-226ENST00000533820 MYH4Q9Y623 1939 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 GCNT3O95395 438 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 AFPP02771 609 aaKnown RBP21.09■□□□□ 0.97
CAPN1-226ENST00000533820 TNFRSF8P28908 595 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 HOXD13P35453 343 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 DAAM2Q86T65 1068 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 RUBCNQ92622 972 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 ATP6V1G3Q96LB4 118 aa21.09■□□□□ 0.97
CAPN1-226ENST00000533820 TAF1DQ9H5J8 278 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms